Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr270g00012 ATGTATGTGGGTCGTCTTTCTCCTTCGACAACAAACTACGGTGGCGGCAACGCGACAACCCCATCTGGATGGTCTAATAAACTATCTTTCACACTTGCATTTTTGCTTTGCCTATGCAAACTTGTCTCTGCCAAATTGAAAACTTCAACTTGTACCTTCCCAATACTTGTTTTTTCTTTACCTCTCTCTGTGCTCATGGGTTGCTGCTTCAGTGTATCTCCAAAGATCAAAGCTGAGAGCCCTCCTCGTTTTGGTTTGAATTCAAAGGATGATAGCAAAGAAGAGAATGGTTTGAGTGGTTTAAGCAACAAGGTGTCCTCTTCATCTATGCTTCTAACTCCTCAGAGTGAAGAGGAGATATTGCAGTCCTGCAATTTGAAGTGCTTCACACTCAATGAGCTAAGAACTGCTACAAGGAACTTTCGTCCGGATAGTATGGTGGGTGAAGGTGGGTTTGGTTGTGTGTTTAAGGGGTGGATCGATGAGCAGACACTTGCCCCTACTAAAGCAGGGACAGGCATGGTCATTGCTGTGAAGAGGCTTAACCAAGAAAGCAACCAGGGACACACTGAATGGTTGACAGAAATCAACTACCTGGGGCAGCTGCATCACCCTAATCTTGTGAAACTAATTGGTTACTCCCTAGAGGATGATCACCGGATTTTGGTGTATGAATTTGTGGCCAAGGGTAGTTTGGATAATCACTTGTTCAGGAGGGCTTCTTACTTTCAACCACTCTCTTGGAAAATCCGTATGAAGGTTGCTCTTGATGCTGCTAAGGGTCTTGCATTTCTTCACAGTGACGAAGTAGATGTAATATACAGAGACTTCAAACCTTCCAATATCTTACTTGATCCTAACTATAATGCAAAACTCTCTGATTTTGGGTTGGCAAAAGATGGACCAGAAGGTGATAAGAGTCATGTCTCTACAAGGGTAATGGGAACCTTAGGCTATGCAGCTCCTGAGTACATTGCCACAGGTCACCTAACCAAAAAGAGTGACATATACAGTTTTGGAGTTGTTCTGCTGGAACTTATGTCAGGCAAACGCGCAGTGGACGGGAACAGGCCAAATGGGGAGCAGAAATTAGTTGAATGGGCCAAACCACTCCTCATCAACAAACACAAGATCTCTCAAGTCATGGATGCACGCATAGAAGGCCAATACTCAAAGCGAGAAGCAAAGAAAGTAGCTCACCTTGCAATTCAATGCCTATCTACAGAACAAAAAGCTAGACCAAACATATATGAGGTGGTGAGATCATTGGAACATCTTCACGATTCCAAAGACACACAGTCTCAGAGTGCTACTCCTAATCCAAGTTTATCTCCTTCTCCTCTTCGCACATAG 1353 0.4383 MYVGRLSPSTTNYGGGNATTPSGWSNKLSFTLAFLLCLCKLVSAKLKTSTCTFPILVFSLPLSVLMGCCFSVSPKIKAESPPRFGLNSKDDSKEENGLSGLSNKVSSSSMLLTPQSEEEILQSCNLKCFTLNELRTATRNFRPDSMVGEGGFGCVFKGWIDEQTLAPTKAGTGMVIAVKRLNQESNQGHTEWLTEINYLGQLHHPNLVKLIGYSLEDDHRILVYEFVAKGSLDNHLFRRASYFQPLSWKIRMKVALDAAKGLAFLHSDEVDVIYRDFKPSNILLDPNYNAKLSDFGLAKDGPEGDKSHVSTRVMGTLGYAAPEYIATGHLTKKSDIYSFGVVLLELMSGKRAVDGNRPNGEQKLVEWAKPLLINKHKISQVMDARIEGQYSKREAKKVAHLAIQCLSTEQKARPNIYEVVRSLEHLHDSKDTQSQSATPNPSLSPSPLRT 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr270g00012 450 Pfam Protein kinase domain 144 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr270g00012 450 MobiDBLite consensus disorder prediction 80 105 - -
Mupr270g00012 450 ProSitePatterns Protein kinases ATP-binding region signature. 147 179 IPR017441 GO:0005524
Mupr270g00012 450 MobiDBLite consensus disorder prediction 432 450 - -
Mupr270g00012 450 Gene3D Transferase(Phosphotransferase) domain 1 227 442 - -
Mupr270g00012 450 Gene3D Phosphorylase Kinase; domain 1 115 226 - -
Mupr270g00012 450 SUPERFAMILY Protein kinase-like (PK-like) 125 434 IPR011009 -
Mupr270g00012 450 CDD STKc_IRAK 147 426 - -
Mupr270g00012 450 MobiDBLite consensus disorder prediction 427 450 - -
Mupr270g00012 450 PANTHER OS01G0588500 PROTEIN-RELATED 105 427 - -
Mupr270g00012 450 ProSiteProfiles Protein kinase domain profile. 141 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr270g00012 450 FunFam Serine/threonine-protein kinase BIK1 107 226 - -
Mupr270g00012 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Mupr270g00012 450 FunFam Serine/threonine-protein kinase PBS1 227 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr270g00012 Mupr-Chr270 111562 115323 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr270g00012 117 431 Glycoside Hydrolase AT3G07070 46.688 5.28e-97 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mupr270g00012 Pkinase 9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr270g00012 - - gmx:106795104 676.011