Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2706g00009 ATGATTGATAAGCAAAAGGTACAAGTGATTATAGGGATGCATAGATGGCCAGAAGCAGCTCTAATGGCTGAAATAGGAAGTCAAGCTCAAATTCCTATCATAGCATTTGCAGAACCTACCATTACCCCACCATTGATGACAGTGCGATGGCCTTTTTTGGTGAGACTGGCTAACAGTGGAACAACATATATAAAATGCATTGCAGATATAGTGAAAACTTATAGTTGGAAGAGAGTAGTAGCCATCTCCGAAGATGATGCATATGGTGGAGATTATGGTATGCTAGCACTGCTATCTGAGGCCCTCCAGGATGTGGATTCAATGATTGATTACCACTTAACTCTTCCACCTATTTCTTCTCTACACGATCCAGGAGGGCTTGTACGTGAAGAGTTGCAGAAGTTGTCACAAACACAATCTCGCGTGTTCATTGTGCTGCAATCTTCATTAGAAATGGCGATTCATTTGTTTAAAGAAGCCTCAAAACTGGGATTTGTGGACAAAGAATCAGCTTGGATACTCCCAGAGAGCACATCTAATTTGCTGGACTCTGTGAACAAGTCTGCTATTTCCTATATGGAAGGAGCTTTAGGAATCAAGACCTACTACTCCGAAATAAGCACCGAATACCAAGACTTTGAGGCTCAGTTCCGGAGAACTTTTTGGCCTAAGAATGCAGAGGAAGACAACCGCTACCCAGGGTTTTATGCTTTGCAAGCATATGACAGCATTAAAATTGTGACTCAAGCAGTAGACAGAATGAACAGTAGGAACACTAGCAGCCCAACGAGTTTACTAAGAGAAATACTATCTAGCAGTTTTCTTGGTTTAAGTGGTCAAATTCAATTTGAAGATGGGAAACTCTTGCAGACTCCTATCTTGAGAGTAGTAAATGTGGCTGGGAGGAGTTACAAGGAATTGTGCTTTTGGAGTCAACAACATGGGTTCACCCCAAACCTCCCTACAGGACAAGGTGAATATAATGTTGCTGGCAATACAAAATGCTTCAGTGGTCTACGTTGGCCTGGGGATCCGAAGCATGATCCAAAGGGCTGGAACATGCCTACTAAACAAAATCCAATGAGAATCGCAGTCCGAAGCAGAACCTCATTTTCCAAGTTTGTCAAGGTTGATTATGATCGGAATCAAAATCCTGCAACATATAGTGGGTTCTGCATTGATATTTTTCAGAGTGTGCTCGGTCTTTTGGGGTATGACTTGCCATACCAGTATTATCCCATTGATGGAACCTATAATGATTTGGTTCAGCTTGTTTATAACAAGACCTATGATGCTGTTGTTGGGGACATGACCATACTAGAGGAAAGATTGCAGTATGTGGATTTTACAGTGCCATATGCAGAATCGGGATTGTCAATGATAGTTCCAACAAAGTTTGAAGAGTCAGCATGGATGTTCACAAAGCCTTTTACCTGGGAACTGTGGATGGTTACAGGTGCCATTTTGATTTACACAATGTTAGTAGTTTGGTACCTTGAGAGAGAATCCAATCCCGAGTTTCATGGCAATTGGAAGAGCCAGATCAGCACAGCTTTTTGGTTTACCTTCTCCTCTATATTCTTTGCTCATAGGGAAAAAATGCATAGCAACTTAACTCGGTTGGTGATGGTCTCGTGGCTCCTGCTAGTTCTGATCCTTACCTCATGCTACACTGCTAGTCTTTCTTCAATGCTCACAATTAAACAACTGCAACCAAATGTCACAGACATTCAGTGGTTGAAGAGGAACAACATGAAAATCGGTTGTGATGGTGACTCATTTGTTAGGTCGTTCCTAGAGAAAGTAGAAACTTTCAAGCCCGAGAACATCATAAATGTTACTAATGAATACAAGTATGATGTTGCATTTGAAAATAACAGCATAGCAGCTGCCTTTCTTGAACTCCCATATGAAAAAGTATTCATTAGTAAATACTGCAACAGATACACCGGTTCCACTCCCAGAACCAGATTTGGAGGATTGGGCTTTATGTTCCAGAAAGGATCTCCAGTGGCCAGAGACGTGTCAAAAGCTATATTACATCTCTCAGAAAACGCAGAGCTGAAGAGATTGGAAGAGAAGTGGTTGATTAACACACAGGAGTGCTCCAACATAACCTCCAATAATACGGATAGTTTGAAGCTGAGAAGTTTATGGATTCTATATGTCATCTCTGGTGCCACTTCCACCATTTGTGTGCTACTATCAACCATCCAGTGTCTAGTAAAATCGTGTCAGCAATGTCAACACGTGGCACCACAAGGCAATGACACACTAAGTGATCATAGCGTGTGGGAAAAGGTGATTACACGTGCAAAGCAGGTTTTTAGCAAAAAGATCAATAATTCAAGTGAGGCACAGGAACAGGTTGTAACAGATTGTTCTCCGAGAGGGGATCATGTGAGCATGACCGATTCTCCATCACCACAGGTTCAGATGACAACACTTCAAAGTAGTTGCTGTACCAAACACTTCAGGGAGGAGACACGAGGATAA 2496 0.4187 MIDKQKVQVIIGMHRWPEAALMAEIGSQAQIPIIAFAEPTITPPLMTVRWPFLVRLANSGTTYIKCIADIVKTYSWKRVVAISEDDAYGGDYGMLALLSEALQDVDSMIDYHLTLPPISSLHDPGGLVREELQKLSQTQSRVFIVLQSSLEMAIHLFKEASKLGFVDKESAWILPESTSNLLDSVNKSAISYMEGALGIKTYYSEISTEYQDFEAQFRRTFWPKNAEEDNRYPGFYALQAYDSIKIVTQAVDRMNSRNTSSPTSLLREILSSSFLGLSGQIQFEDGKLLQTPILRVVNVAGRSYKELCFWSQQHGFTPNLPTGQGEYNVAGNTKCFSGLRWPGDPKHDPKGWNMPTKQNPMRIAVRSRTSFSKFVKVDYDRNQNPATYSGFCIDIFQSVLGLLGYDLPYQYYPIDGTYNDLVQLVYNKTYDAVVGDMTILEERLQYVDFTVPYAESGLSMIVPTKFEESAWMFTKPFTWELWMVTGAILIYTMLVVWYLERESNPEFHGNWKSQISTAFWFTFSSIFFAHREKMHSNLTRLVMVSWLLLVLILTSCYTASLSSMLTIKQLQPNVTDIQWLKRNNMKIGCDGDSFVRSFLEKVETFKPENIINVTNEYKYDVAFENNSIAAAFLELPYEKVFISKYCNRYTGSTPRTRFGGLGFMFQKGSPVARDVSKAILHLSENAELKRLEEKWLINTQECSNITSNNTDSLKLRSLWILYVISGATSTICVLLSTIQCLVKSCQQCQHVAPQGNDTLSDHSVWEKVITRAKQVFSKKINNSSEAQEQVVTDCSPRGDHVSMTDSPSPQVQMTTLQSSCCTKHFREETRG 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2706g00009 831 SMART GluR_14 362 698 IPR001320 GO:0015276|GO:0016020
Mupr2706g00009 831 CDD PBP1_GABAb_receptor_plant 2 317 IPR044440 -
Mupr2706g00009 831 Pfam Bacterial extracellular solute-binding proteins, family 3 385 696 IPR001638 -
Mupr2706g00009 831 Gene3D - 349 468 - -
Mupr2706g00009 831 PIRSF IGluLR_plant 1 830 IPR017103 -
Mupr2706g00009 831 FunFam Glutamate receptor 63 231 - -
Mupr2706g00009 831 Gene3D - 469 608 - -
Mupr2706g00009 831 SUPERFAMILY Periplasmic binding protein-like II 346 696 - -
Mupr2706g00009 831 FunFam Glutamate receptor 470 600 - -
Mupr2706g00009 831 MobiDBLite consensus disorder prediction 787 808 - -
Mupr2706g00009 831 CDD GluR_Plant 359 696 - -
Mupr2706g00009 831 Gene3D - 609 703 - -
Mupr2706g00009 831 FunFam Glutamate receptor 360 471 - -
Mupr2706g00009 831 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 20 776 IPR015683 -
Mupr2706g00009 831 SUPERFAMILY Periplasmic binding protein-like I 2 311 IPR028082 -
Mupr2706g00009 831 Gene3D - 62 232 - -
Mupr2706g00009 831 Pfam Receptor family ligand binding region 5 299 IPR001828 -
Mupr2706g00009 831 Pfam Ligand-gated ion channel 697 726 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2706g00009 Mupr-Chr2706 55914 59012 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2706g00009 1 735 Ion Channels AT2G29120 33.377 2.56e-134 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2706g00009 - - gmx:100818619 1427.92