Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2706g00003 ATGGATATTCATGCATGTGGTGCAACTTCTGAAGGGATTCTTGAGAATGTATGGGCCAAAGTTATGAGCTGTGATAGGGCTGATGGAAGAAAAGGTGATGCAGCAGAATCTTCTAATTCTTGGGAAGAACTTCCTAGTCTTGATGGAAGAGAAGGGTCCATGGAAATTCTACAAAGGCTTCCTAGTTTAGGGAGGTGGATATCAATGGGAGCTGATTTCTGGGAAGAAGTTTTAGATGGTGTTATTCTACCTAACACAAGGAATAAAGAAGATTCTAGCAATAACAATTTGGAAATTGGAAGGGCTAATGAATCTAATGAAAAGGTGGAAGATGCTGTGAGAATAGAGAAAGTAGTTGCAAAACACTACAGGGGAGTTAGGAGAAGGCCATGGGGTAAATATGCTGCTGAGATAAGAGACTCATCAAAGAAAGGTGCTAGAGTTTGGCTTGGAACATTTGACACAGCTGAAGAAGCAGCTTTGGCTTATGACAAGGCTGCTTTGAGGATTAGGGGTCCAAAGGCATACCTTAATTTCCCACTTGAGAGGGTTGCAAATGCTTTAGAATGTGACCATAAAGGAACTCATCTTACTTGCACATGCATAGGGGTCAAAGAAAAAGTGATCAACTCCAGGAAGAGAGGGTCACGGGAAAGAGAAGTATTTGATGATATGATGAATGAACAACATGCATCAAAAAAGGTGGCAGTGACAGGCTTGGAATGCATGGTAGAAAATGAACTGGCTCAAAACTATTTTCTAAATATTTTCCGGTCCCCCAAGGAAAAGACTGCGTAA 798 0.4123 MDIHACGATSEGILENVWAKVMSCDRADGRKGDAAESSNSWEELPSLDGREGSMEILQRLPSLGRWISMGADFWEEVLDGVILPNTRNKEDSSNNNLEIGRANESNEKVEDAVRIEKVVAKHYRGVRRRPWGKYAAEIRDSSKKGARVWLGTFDTAEEAALAYDKAALRIRGPKAYLNFPLERVANALECDHKGTHLTCTCIGVKEKVINSRKRGSREREVFDDMMNEQHASKKVAVTGLECMVENELAQNYFLNIFRSPKEKTA 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2706g00003 265 Gene3D AP2/ERF domain 121 182 IPR036955 GO:0003700|GO:0006355
Mupr2706g00003 265 SMART rav1_2 122 186 IPR001471 GO:0003700|GO:0006355
Mupr2706g00003 265 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Mupr2706g00003 265 PRINTS Ethylene responsive element binding protein signature 123 134 IPR001471 GO:0003700|GO:0006355
Mupr2706g00003 265 SUPERFAMILY DNA-binding domain 122 181 IPR016177 GO:0003677
Mupr2706g00003 265 CDD AP2 121 180 IPR001471 GO:0003700|GO:0006355
Mupr2706g00003 265 ProSiteProfiles AP2/ERF domain profile. 122 180 IPR001471 GO:0003700|GO:0006355
Mupr2706g00003 265 PANTHER DNA-BINDING DOMAIN 95 211 IPR044808 GO:0003700|GO:0009873
Mupr2706g00003 265 FunFam Ethylene-responsive transcription factor 2 121 182 - -
Mupr2706g00003 265 Pfam AP2 domain 122 172 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2706g00003 Mupr-Chr2706 22034 23093 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2706g00003 13 217 AP2-EREBP Transcription Factor Family AT4G18450 42.654 3.70e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr2706g00003 AP2 3e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2706g00003 - - gmx:100820226 418.698