Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2706g00002 ATGATGGGAAGCAAGAAAAACTACTCGGAAGAAGGAGCGCTTTTAATTTCCCAAGGCCAAACAGACTTACCCTTCAACGAGAACGATCCACAGGACATGGTGATATACCAAGTGTTGAACGAGGCCAATGCTTTGAGCAACACGTTTCTGCCCCAGAGGCCCCCAATGGGCCTGGAGCCCACCAGAAACATCGCTAAGAAGCACTACAGAGGAGTCCGACGCCGACCCTGGGGGAAGTACGCCGCCGAGATTCGTGACTCGGCTCGCCACGGAGCCAGAGTGTGGCTCGGCACTTTCCAGACCGCCGAAGAGGCTGCCATGGCTTACGACAGAGCCGCTTTCAAGATGCGCGGCGCCAAAGCTCTCCTCAATTTCCCAGCCGAAATTGTCGCTGCTGCTGACTTGTCTTTCTCTAATATTCACGATGCTGGAAGTTCTAATTCCACTCAGGTTCGTGCTTTTGAATTGTATTCCCCTTCAATTTTGTTCAAATTCACCAAATTTTGA 507 0.5148 MMGSKKNYSEEGALLISQGQTDLPFNENDPQDMVIYQVLNEANALSNTFLPQRPPMGLEPTRNIAKKHYRGVRRRPWGKYAAEIRDSARHGARVWLGTFQTAEEAAMAYDRAAFKMRGAKALLNFPAEIVAAADLSFSNIHDAGSSNSTQVRAFELYSPSILFKFTKF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2706g00002 168 SUPERFAMILY DNA-binding domain 68 128 IPR016177 GO:0003677
Mupr2706g00002 168 CDD AP2 67 127 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 ProSiteProfiles AP2/ERF domain profile. 68 126 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 SMART rav1_2 68 132 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 Pfam AP2 domain 68 118 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 Gene3D AP2/ERF domain 67 128 IPR036955 GO:0003700|GO:0006355
Mupr2706g00002 168 PRINTS Ethylene responsive element binding protein signature 92 108 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 PRINTS Ethylene responsive element binding protein signature 69 80 IPR001471 GO:0003700|GO:0006355
Mupr2706g00002 168 PANTHER DNA-BINDING DOMAIN 58 138 IPR044808 GO:0003700|GO:0009873
Mupr2706g00002 168 FunFam Ethylene-responsive transcription factor 2 67 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2706g00002 Mupr-Chr2706 16897 18003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2706g00002 23 129 AP2-EREBP Transcription Factor Family AT5G47220 50.000 4.12e-38 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mupr2706g00002 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2706g00002 K13433 - gmx:100811533 228.024