Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2687g00002 ACCTTCCAGAAGGTTCGAACCTTTTCAGGAAAGCAAATGGCGGCGGCGATTTCGGCTCCGGCGGCGGCGGTTCCGGGGGTGGCGCAAAACGGCGCACAATTCGGGAATGCGTCCCTGTACGTTGGAGATCTCGAAGCGAATGTGAACGAGGGACAGTTGTATGATCTGTTCAGCCAGGTGGCTCAGGTGGTTTCGATTAGGGTTTGTAGGGATCAGACGAGACGATCCTCTCTTGGTTACGCTTATGTCAACTTTGCCAACGCCCAGGATGCGGCCAATGCCATGGAGCATCTGAATTTCACTCCCCTGAATGGAAAAGCCATTCGAATAATGTTTTCTCATCGAGATCCTAGTATTAGCAAAAGTGAATATGCAAATGTGTTTACGAAGAACCTGGACGCATCAATAGATAACAAGGCGTTACATGACACTTTTGCTGCCTTTGGATCTGTACTTTCTAGTAAGGTAGCTGTTGATGGCAGTGGTCAATCAAGA 495 0.4909 TFQKVRTFSGKQMAAAISAPAAAVPGVAQNGAQFGNASLYVGDLEANVNEGQLYDLFSQVAQVVSIRVCRDQTRRSSLGYAYVNFANAQDAANAMEHLNFTPLNGKAIRIMFSHRDPSISKSEYANVFTKNLDASIDNKALHDTFAAFGSVLSSKVAVDGSGQSR 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2687g00002 165 FunFam Polyadenylate-binding protein 30 125 - -
Mupr2687g00002 165 Gene3D - 119 165 IPR012677 -
Mupr2687g00002 165 PANTHER RNA BINDING PROTEIN 94 164 - -
Mupr2687g00002 165 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 37 115 IPR000504 GO:0003723
Mupr2687g00002 165 Gene3D - 18 118 IPR012677 -
Mupr2687g00002 165 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39 109 IPR000504 GO:0003723
Mupr2687g00002 165 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 125 165 IPR000504 GO:0003723
Mupr2687g00002 165 SMART rrm1_1 38 111 IPR000504 GO:0003723
Mupr2687g00002 165 SUPERFAMILY RNA-binding domain, RBD 37 161 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2687g00002 Mupr-Chr2687 18042 19016 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2687g00002 14 165 Eukaryotic Initiation Factors Gene Family AT4G34110 59.868 2.51e-59 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2687g00002 K13126 - gmx:100783163 230.335