Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2670g00001 ATGGGAAAGAGAAAAGGTGGTTCCATGCAAGAAACCCTCCTTCGTAGACTTGAATCGTGCAAGTCCACATACTCTACCGTCGAAGAATTCGTCAGCCATCTCCGTTCAACTTATCTCGATTATCAACGAATCAAACACCAAACCCTAATTCGATTAGTTCAAGAAGCTCTTCAGGACACTAAGAAGCCCAACCATTGCGACGATGACGACCACGAAGGAGATTCTCGAACCGCGTCTCCAAAGCGCCGGAAAAAAATCGATGAGAGTGAAGAGAGACTGCAAAGGACGGAAGAGTTGTACGTCCCAAGGAGCGCGCAGAGCGGTTCCCCGGCGCCGTCCTCCGCTTCCGAGAGCGACCGGGAAGTAACCGTGTCCACGTTGGAGGATGCAATTTACGAGGAGAGGATGGAACCTGAGTTCGATTTGATTAAGACAATGCTGCGCAATACCTATACGCAGAAGAAGGTTGCGGTGGCGGAGGAAAAGAACGTTGAATTGGAGGTGGGGAGAAGCAGAAGCAGTACGGCTGTTGCGAAGCAGGAAAGGAAAGAAGTGAGGGCATCAGTTTCGGGTGATGAGGTGAACGAGAAGGCTGGACCTATGTTTAGGGATTTTGGTGGGATGAAAAAGGTTTTGGAGGAATTGAAGATAGAAGTGCTTATGCCTTTGTTATATCCTCAAGTGCCTAAGAAGTTTGGTATGTGGCCAATAGCTGGTATTTTGCTGTATGGACCACCTGGCTGTGGGAAGACTAGACTTGCTCGTGCTATAGCTAACGAGTCTGCTCGTCCTTTTTATGAAATTTCAGCTACTGAGGTGGTTTCTGGAGTCTCAGGTGAATCCGAAGAAAATATTAGAGAACTTTTCTCTAAAGCATACAAGACTGCTCCGTCTATTGTCTTTATTGATGAGATTGATGCAATTGCTTCGAAGAGAGAGAATTTGCAGCGTGAGATGGATAAACGAATTGTGACACAATTAATGACTTGCACAGATCAATCAAAAATGCCTGGCCATGTTCTTGTAATTGGAGCTACAAATAGGCCTGATGCTATTGATCCTGGCCTGAGAAGGTCTGGTCGGTTTGATCGTGAGATTTTCATTGGCTATCCCGATGAATCTGCAAGGGAGGAGATCCTTTTCGTGCTTATTTGCAATTTTACAAATATGAGTTTATTTGATCTACGGAAATTAGCCAGGGCTACACCAGGATTTGTTGGTGCTGATTTGGTTGCTCTGGTTAAAAAGGCTGTTAATCTGGCAATAAAGAGAATAATTGATGAAAGGAAAAGTAAATTATCTCAAAAAGGCATGAGTGATGAGCATGCTGAAGACGTCTGGAGGGAACCTTGGTCATCTGAAGAAATGGATAAGCTTGCCATCAAAATGTCGGATTTTGAGGAAGCAGTCAAACTGGTGCAACCTTCATCAAGAAGAGAAGGGTTCTCTTCCATTCCCAATGTAAAATGGGAAGACGTTGGAGGGCTTGATCATTTAAGACAGGAGTTTGAACGTTACATTGTAAAGCGTATAAAATGTCCTGAAGTTTATGAGAGGGTTAGGTGGCGTCTTGAGACTGGATTTTTGCTTTATGGACCTCCTGGTTGTGGTAAAACATTGATTGCCAAAGCTGTTGCCACCGAGGCAGGTGCTAGTTTTATTCATATTAAGGGACCTGAACTTTTAAATAAATATGTTGGAGAAAGTGAGCTTGCAGTTCGTACATTATTTAGCCGTGCAAGGACATGTGCTCCTTGTATACTTTTTTTTGATGAGGTGGACGCTTTGACAAACAACCATTATAAGGAAGGTGGTTCGGTTAATGAAGGACTATTGAGACAGATGGTGCAGAGCAACGAAGGGGTGCCTGAGGTGATGGATCCTGCTGTCCTACGGCCTGGTAGGTTTGGTAAACTTGTTTACGTTCCACTTCCAAGCGCAGACCAGCGAGTTTTGATACTGAAAACTCTTGCAAGAGAGATGTCTATTGATGCCTCTGTGGATTTGAGTGCCATAGGAAAAAAGGAAGCTTGTGAAAGCTTTAGTGGCGCCGACCTTGCGGCATTGATGGATGAAGCAACAGCGGCTGCTCTTGAAGAGAACTCGAACTCCACTGACGGTGCATGGACTATCAAGATAAATCATTTTGAAGTTGCGCTGAGTAAAATCCATCCGTCTGTGTCGGACAGGCAAAAGCAGCACTATCAACACTTTTCAGAGAGCTTTAAAGCAGCATGA 2238 0.4464 MGKRKGGSMQETLLRRLESCKSTYSTVEEFVSHLRSTYLDYQRIKHQTLIRLVQEALQDTKKPNHCDDDDHEGDSRTASPKRRKKIDESEERLQRTEELYVPRSAQSGSPAPSSASESDREVTVSTLEDAIYEERMEPEFDLIKTMLRNTYTQKKVAVAEEKNVELEVGRSRSSTAVAKQERKEVRASVSGDEVNEKAGPMFRDFGGMKKVLEELKIEVLMPLLYPQVPKKFGMWPIAGILLYGPPGCGKTRLARAIANESARPFYEISATEVVSGVSGESEENIRELFSKAYKTAPSIVFIDEIDAIASKRENLQREMDKRIVTQLMTCTDQSKMPGHVLVIGATNRPDAIDPGLRRSGRFDREIFIGYPDESAREEILFVLICNFTNMSLFDLRKLARATPGFVGADLVALVKKAVNLAIKRIIDERKSKLSQKGMSDEHAEDVWREPWSSEEMDKLAIKMSDFEEAVKLVQPSSRREGFSSIPNVKWEDVGGLDHLRQEFERYIVKRIKCPEVYERVRWRLETGFLLYGPPGCGKTLIAKAVATEAGASFIHIKGPELLNKYVGESELAVRTLFSRARTCAPCILFFDEVDALTNNHYKEGGSVNEGLLRQMVQSNEGVPEVMDPAVLRPGRFGKLVYVPLPSADQRVLILKTLAREMSIDASVDLSAIGKKEACESFSGADLAALMDEATAAALEENSNSTDGAWTIKINHFEVALSKIHPSVSDRQKQHYQHFSESFKAA 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2670g00001 745 Pfam ATPase family associated with various cellular activities (AAA) 240 369 IPR003959 GO:0005524|GO:0016887
Mupr2670g00001 745 Pfam ATPase family associated with various cellular activities (AAA) 529 635 IPR003959 GO:0005524|GO:0016887
Mupr2670g00001 745 MobiDBLite consensus disorder prediction 60 98 - -
Mupr2670g00001 745 FunFam Ribosome biogenesis ATPase RIX7 190 369 - -
Mupr2670g00001 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 202 476 IPR027417 -
Mupr2670g00001 745 SMART AAA_5 236 372 IPR003593 GO:0016887
Mupr2670g00001 745 SMART AAA_5 524 646 IPR003593 GO:0016887
Mupr2670g00001 745 Gene3D - 173 378 IPR027417 -
Mupr2670g00001 745 Pfam AAA+ lid domain 393 428 IPR041569 -
Mupr2670g00001 745 Pfam AAA+ lid domain 666 704 IPR041569 -
Mupr2670g00001 745 Gene3D - 379 484 - -
Mupr2670g00001 745 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 742 IPR027417 -
Mupr2670g00001 745 FunFam Cell division control protein 48 homolog C 371 480 - -
Mupr2670g00001 745 Gene3D - 486 736 IPR027417 -
Mupr2670g00001 745 Gene3D - 645 721 - -
Mupr2670g00001 745 MobiDBLite consensus disorder prediction 100 121 - -
Mupr2670g00001 745 MobiDBLite consensus disorder prediction 60 123 - -
Mupr2670g00001 745 PANTHER AAA-FAMILY ATPASE 91 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2670g00001 Mupr-Chr2670 2479 6330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2670g00001 196 743 Calmodulin-binding Proteins AT3G56690 34.253 1.48e-101 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2670g00001 K14571 - gmx:100809594 998.038