Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2662g00004 ATGGATTCCCATACCCATCATCATCAGGGTTACCAACCCAACCAATCCTCTTCTGGGTTGCTTCGTTTCCGCTCTGCGCCCACTTCACTCCTTTCCAATCTAGCACCTTCTTTTGCCACCTACGCCGGCGACGAAGCTGTTGCTTCTAGTAGCTTCCAAGACTTGGAAGCAAACCACAAGGGTTCTTTTAAGGCTTTGAGTTCCATGAGTTCGCATAAGGGCTATGGTGCCGGGTTGCCACCTCACTATCCCAGGCACGGTTCTTCTTCAGCTGCTGCTACTTCCAGTTCTGCTATGGACGCCTCTTATGGGTTGGTGGCTTCAATGGGGATGGATCATGAACCGTCCCACAAGGGGTTTGCCTCTAATCTTCTCAGGCAGAGTAGCTCCCCTGCTGGCCTCTTCTCCAACAACAACATTTCCTTCCAAAATGGGTTTGCCACCATGAAAGGTGTTGGAAACTATGGTGGAGTGAATGGAAGTAATGGTGAACTTAGTCCATGCATCAACAGATTGAAGAATCAGATTAGCTTCTCACCAAGAAACGCTTCTTCCCTGGGAATGTTGTCACAAATCTCAGAAATAGGGAGTGAAGACATTGAGGCAACTAGTCCTGATGATGATGGGAGGCATGGAGGTAGTGGCACTGGTGATGCTCAACATTATGGACCTGGATTCCCCTATGGTTCTTGGAATGATACTCCACAACTCTCAGAAAATCTCAGTGGCTTGAAAAGAGGGAGAAGTGGCAATGAAAAGATGTTTTCTGATGTTCAGAATGGGGAGCTGGGAAACCAAGTTAATATATTATCACATCACTTGAGTTTACCAAAAACTTCAGCAGAGATGATTACTATGGAGAAGTTGCTTCAGTTCCCTGATTCTGTTCCTTGTAAAATCAGAGCAAAGCGAGGCTGTGCTACTCATCCTCGAAGCATTGCTGAAAGGGTGAGAAGAACTCGGATCAGTGAGAGAATGAGAAAATTACAAGAGCTTGTCCCAAACATGGACAAGCAAACCAACACAGCAGACATGTTGGACTTGGCTGTTGAATACATTAAAGATCTTCAGGAACAATTCAAGACTCTAAGTGATAAACGGGCAAACTGCAAGTGTATAAGCATGCAAAAGGAAGATACAAATCAAATTGCTTGA 1155 0.4545 MDSHTHHHQGYQPNQSSSGLLRFRSAPTSLLSNLAPSFATYAGDEAVASSSFQDLEANHKGSFKALSSMSSHKGYGAGLPPHYPRHGSSSAAATSSSAMDASYGLVASMGMDHEPSHKGFASNLLRQSSSPAGLFSNNNISFQNGFATMKGVGNYGGVNGSNGELSPCINRLKNQISFSPRNASSLGMLSQISEIGSEDIEATSPDDDGRHGGSGTGDAQHYGPGFPYGSWNDTPQLSENLSGLKRGRSGNEKMFSDVQNGELGNQVNILSHHLSLPKTSAEMITMEKLLQFPDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTADMLDLAVEYIKDLQEQFKTLSDKRANCKCISMQKEDTNQIA 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2662g00004 384 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 26 380 - -
Mupr2662g00004 384 MobiDBLite consensus disorder prediction 200 236 - -
Mupr2662g00004 384 MobiDBLite consensus disorder prediction 1 20 - -
Mupr2662g00004 384 SMART finulus 312 362 IPR011598 GO:0046983
Mupr2662g00004 384 CDD bHLH_AtbHLH_like 311 364 IPR045239 -
Mupr2662g00004 384 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 306 356 IPR011598 GO:0046983
Mupr2662g00004 384 Pfam Helix-loop-helix DNA-binding domain 311 357 IPR011598 GO:0046983
Mupr2662g00004 384 Gene3D - 307 380 IPR036638 GO:0046983
Mupr2662g00004 384 FunFam Transcription factor bHLH130 family 307 376 - -
Mupr2662g00004 384 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 309 371 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2662g00004 Mupr-Chr2662 37071 39934 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2662g00004 1 362 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 46.193 8.90e-89 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr2662g00004 HLH 3.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2662g00004 - - gmx:100819605 633.639