Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2644g00001 ATGTCGAGCTGCAGCATCGATGTTGCGCCTGAGCAACTCTGCTACATCCCCTGCAACTTTTGCAATATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCCTGTTTGACATTGTGACCGTTCGATGTGGGCACTGCACCAATCTATGGTCCGTGAACATGGCCGCCGCGTTTCAGTCACTGTCATGGCAAGATGTTCAGGGACCTGGTCACTGCAATCCAGAGTACAGGATTGACACTGGCTCCACGTCCAAATGCAACAACAGGATTGCAATGCGTGCACCCACCACTCATGTAACTGAGGAAAGGGTTGTGAACCGGCCTCCCGAGAAGAGGCAGCGCGTACCTTCTGCTTATAATCAGTTTATAAAGGAAGAGATTCAGAGGATCAAAGCCAATAATCCTGATATCAGTCACAGAGAAGCTTTCAGTACAGCTGCAAAGAACTGGGCACATTTTCCCCATATTCATTTTGGGCTGATGTTGGAGAGCAACAACCAAGCTAAGATGGAGAATGTCTCTGAGAAGCATTTAATGTCAAGGGCTGCGCTATTGAACAAATGA 561 0.4813 MSSCSIDVAPEQLCYIPCNFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMAAAFQSLSWQDVQGPGHCNPEYRIDTGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLMLESNNQAKMENVSEKHLMSRAALLNK 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2644g00001 186 CDD HMG-box_SF 113 149 - -
Mupr2644g00001 186 SUPERFAMILY HMG-box 103 152 IPR036910 -
Mupr2644g00001 186 PANTHER PROTEIN YABBY 6-RELATED 1 169 IPR006780 GO:0007275
Mupr2644g00001 186 FunFam axial regulator YABBY 5-like 97 155 - -
Mupr2644g00001 186 Gene3D High mobility group box domain 98 176 IPR036910 -
Mupr2644g00001 186 Pfam YABBY protein 9 159 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2644g00001 Mupr-Chr2644 25445 29092 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2644g00001 8 169 C2C2-YABBY Transcription Factor Family AT2G26580 77.778 5.79e-92 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Mupr2644g00001 YABBY 2.9e-69 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2644g00001 K25796 - gmx:100804731 385.956