Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2642g00005 ATGAAGAATAGGGTCATTGGACACGGTTTTGTTGCTGGTAAACCGGTATCCGAACAGAGCAGAAAGACAGTAAGCTTAGGAGGAGACAGAAAAGAGAGAAATCGGAAGGTAGCTAGGGCTTTGGCACGACGAAGAATGGGGAGGAAGAAGGTGGAGATAAAGCGAATCGAGAACAAAAGCACACGGCAGATAACATTCTCGAAGAGGCGCAATGGATTGATGAAGAAAGCGCGCAAGTTGTCCATTCTCTCCGACGCGAACATGGCGCTCGTCGTCTTCTCCAGCACCGGGAAGCTCTTCGAGCTCAGTAACGGTGACAGGTACACGCAAATAGCATAG 339 0.4956 MKNRVIGHGFVAGKPVSEQSRKTVSLGGDRKERNRKVARALARRRMGRKKVEIKRIENKSTRQITFSKRRNGLMKKARKLSILSDANMALVVFSSTGKLFELSNGDRYTQIA 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2642g00005 112 SMART madsneu2 46 105 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 Gene3D - 58 111 IPR036879 GO:0003677|GO:0046983
Mupr2642g00005 112 ProSiteProfiles MADS-box domain profile. 46 106 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 55 101 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 SUPERFAMILY SRF-like 46 106 IPR036879 GO:0003677|GO:0046983
Mupr2642g00005 112 PRINTS MADS domain signature 48 68 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 PRINTS MADS domain signature 83 104 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 PRINTS MADS domain signature 68 83 IPR002100 GO:0003677|GO:0046983
Mupr2642g00005 112 PANTHER SERUM RESPONSE FACTOR HOMOLOG 46 108 - -
Mupr2642g00005 112 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2642g00005 Mupr-Chr2642 10900 11279 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2642g00005 46 111 MADS-box Gene Family AT5G10140 66.667 4.35e-27 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mupr2642g00005 SRF-TF 8.2e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2642g00005 - K09264 gmx:100778392 106.301