Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2628g00002 ATGCCTTCGAGTTCGAATTCAAAGCAGAAAAAGAAGCAATCGAAGGTGCAGCAGCACACATCATTGTCGTCCAATGGCACCACGCCTTCCAAAACTCACCAACCACAAGAGCTCACCTCTTTATGCGAAGAAGCTTCTCGAAAGTTCCCTTCTCTCATCGCAAAATCCGCGTTCGTCGGCGAAATCACTCATGTCGATGACACCGTTCCTGTTTCTAAGGGCTTCAGAATTTGGCTCTCCGAACCTTCCATGCTCTCCTCCTCTCTCTCCCCCGGTTCCATTGTCTCGGTGTCTATTCCATCTTCAGGGGAGAAAAGTTTGCAATTGCATAGCTTTCCCCTCGCCTCGTTAGCTAACGAATGTGTCAAATTCCATGGACTGGAAATTGCCAAGGCATTCGATGATGATGCAGGAAACTACTTTGTGCTTGCAACGGTGTTTCCTTCTAGTAAGGTTTTGAAGAATGGAGTACGCCTGTCTTCAAACCTTTCTTATTCCATGGGATGTCCACCTTTGGGCACAAGTGTGTTTGTTCATGCAATACAGAAACAATTCTTGTCTAGTCTTGCCAATGGGAGCAACGAACTGCATTCTACAGAAAATAATTGCCTATCTATATATAATTGCAAGGAATTGTATCTTCAGTTGGTTCCTTCTAAGAATGGGCTAGTGTTGAAATTTAATAAATTGCCTTCATTGGACGTGTCTAAGGTGAAATCTCATGTCCAATCTGAGAAAGATGCTGTTGCATCTCCTGCAACACCTTCTTATGGATCAAAGTTTTCTAATGCCAGTGGGCTGTCTTCTCCACTATTTGAAGATTCAGCATCTAGTGTGCCCAATCAGAATAGTCAATCACTGATTTCAGCTGATGTTAGCTTAGCATTAGGGGATGAAAGTTCTAAAAAATTACTACAGATGTGTGCAACTTCATGGTTGTATTCTCGCTCTTTACTGCTAGGGAATCTTGTCAGTGTTCCAATTTTTTCAGAGTTATGCTTTTTCCAAGTGATAGGAGCTGAGAAGATGCCAGTTGCCAGATCCGATCATTATCAATTAAATGGAAGCAGTAATTTATTTCCCGAGGATTCTGATATAGCAGATAGTGTAAATCAGGCTTTCACTGTTAATTATGAAACAAAAGTATTTTTATCTCTGCCATCAAATACAGCAGCATCTGAAGAGCCAATTCAAAGGGATATACCTTGTGTGAAACTAGAACACAAAGTTGCTAATGCTAGCTTACATGATAATATCTCTAAATTGGGTGGTCTATCCATAGAATATACACTTTTAAAGGACATAATTTCTTCGTCAGTGAACGATGCTTTATCAAGTTTTGGTTTAAGAACTACAAGAGGTGTCCTTCTTCATGGTCCACCTGGTACGGGAAAGACTTCCCTGGCTCAATTATGTGCTCATGATGTTGGAGTCAATTTTTTCCCAATAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAGCAAGCGTTGCATGAAGTTTTTGATTCAGCCATTCAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCCCCTGCAAGGAAAGATGGAGGTGAAGAACTATCCCAAAGATTGGTTGCGACTTTATTGAATCTGATGGATGGAATTAGTAGAACTGAAGGTTTACTTGTAATTGCTGCCACTAACCGGCCTGACCATATTGAGCCAGCTCTCAGGCGACCAGGAAGATTTGACAAGGAAATTGAAATTGGTGTGCCATCCCCCAAACAACGTTCGGATATTTTGCTCACTATTCTCAGTGAAATGGATCACTCTGTCTCTGAGTTACAAATCGAACACCTTGCTACAGTTACTCATGGTTTTGTGGGTGCTGATCTAGCTGCACTTTGCAATGAGGCAGCCCTGATTTGTCTCCGGCGGTATGCTAATTTTAAGAAGACTTATGGTTCTTTCTCAAATAACATAACAGAGCAACCCACTCAGATGAATGGTGCAACAAACTCAATAGATCATTCGAGTGTTGCAACTTCGTCTGTTTCAGATATGTCAGTGGCCTCCAGTCTTGTATTACCTTCCTGCATGATGGGAATGACTTCTGAAACTATAGAAGTAATTCCTGATAGTGGTGAAGAAGAGCAGATTTTGAAAGTAAGTTTTGAAGATTTTCAGAAGGCTAGGATGAAAATAAGACCTAGTGCGATGAGAGAGGTAATCCTTGAGGTTCCAAAGGTTAATTGGAAAGATGTTGGCGGTCAAAAGGAGGTCAAAGCTCAATTGATGGAAGCAGTTGAATGGCCACAGAAACACCATGATGCATTCAACCGAATTGGGACTCGCCCACCTACAGGTGTATTAATGTTTGGGCCTCCAGGTTGTAGTAAAACCCTCATGGCACGTGCAGTTGCTTCTGAAGCCGGGCTGAACTTTCTAGCAGTCAAGGGTCCTGAACTCTTCAGCAAATGGGTTGGGGAATCTGAGAAGGCTGTCAGATCATTATTTGCAAAAGCAAGGGCCAATGCCCCATCAATAGTATTTTTTGATGAAATAGATAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGTGTTTCCGTGTCAGATAGGGTCATGAGTCAACTTCTCGTTGAGTTGGATGGTCTGCATCAAAGAGTCAACGTCACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCCGCCCTATTAAGACCAGGACGCTTCGACCGGCTGCTATATGTTGGACCTCCAAATGAGGTGGACAGGGAAGAAATATTTCGCATCCATCTGCGTAAAATCCCATGTGGCTCTGATGTTAGCCTTAAAGAACTAGCTCAACTCACAGATGGTTGTACTGGGGCTGACATATCATTGATATGTAGGGAGGCAGCTGTTGCAGCAATTGAGGAGAGCCTTGATGCTTCAGTTATAACAATGAAGCATTTAAAGATGGCAATCAAACAGATCCAGCCATCAGAAGTTCACTCCTACCAAAAGCTGTCAACAAAATTTCAAAGGGCCGTCTACTGCTGTGATATGAAGGATGAATTCAATCATATGCAGGGCGACAGTAGATCTACTCAGTTCAACATTTGGTCGTCAACTGAGTTAGATCTACATAATTTGTCTATGATGATTGGATGA 3144 0.4227 MPSSSNSKQKKKQSKVQQHTSLSSNGTTPSKTHQPQELTSLCEEASRKFPSLIAKSAFVGEITHVDDTVPVSKGFRIWLSEPSMLSSSLSPGSIVSVSIPSSGEKSLQLHSFPLASLANECVKFHGLEIAKAFDDDAGNYFVLATVFPSSKVLKNGVRLSSNLSYSMGCPPLGTSVFVHAIQKQFLSSLANGSNELHSTENNCLSIYNCKELYLQLVPSKNGLVLKFNKLPSLDVSKVKSHVQSEKDAVASPATPSYGSKFSNASGLSSPLFEDSASSVPNQNSQSLISADVSLALGDESSKKLLQMCATSWLYSRSLLLGNLVSVPIFSELCFFQVIGAEKMPVARSDHYQLNGSSNLFPEDSDIADSVNQAFTVNYETKVFLSLPSNTAASEEPIQRDIPCVKLEHKVANASLHDNISKLGGLSIEYTLLKDIISSSVNDALSSFGLRTTRGVLLHGPPGTGKTSLAQLCAHDVGVNFFPINGPEIVTQYYGESEQALHEVFDSAIQAAPAVVFIDELDAIAPARKDGGEELSQRLVATLLNLMDGISRTEGLLVIAATNRPDHIEPALRRPGRFDKEIEIGVPSPKQRSDILLTILSEMDHSVSELQIEHLATVTHGFVGADLAALCNEAALICLRRYANFKKTYGSFSNNITEQPTQMNGATNSIDHSSVATSSVSDMSVASSLVLPSCMMGMTSETIEVIPDSGEEEQILKVSFEDFQKARMKIRPSAMREVILEVPKVNWKDVGGQKEVKAQLMEAVEWPQKHHDAFNRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREEIFRIHLRKIPCGSDVSLKELAQLTDGCTGADISLICREAAVAAIEESLDASVITMKHLKMAIKQIQPSEVHSYQKLSTKFQRAVYCCDMKDEFNHMQGDSRSTQFNIWSSTELDLHNLSMMIG 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2628g00002 1047 FunFam Putative vesicular transport protein (CDC48) 406 584 - -
Mupr2628g00002 1047 CDD RecA-like_CDC48_NLV2_r1-like 421 583 - -
Mupr2628g00002 1047 Gene3D - 917 987 - -
Mupr2628g00002 1047 SMART AAA_5 780 918 IPR003593 GO:0016887
Mupr2628g00002 1047 SMART AAA_5 451 587 IPR003593 GO:0016887
Mupr2628g00002 1047 ProSitePatterns AAA-protein family signature. 886 904 IPR003960 GO:0005524|GO:0016887
Mupr2628g00002 1047 Gene3D - 405 586 IPR027417 -
Mupr2628g00002 1047 Pfam AAA+ lid domain 610 641 IPR041569 -
Mupr2628g00002 1047 Pfam AAA+ lid domain 938 983 IPR041569 -
Mupr2628g00002 1047 FunFam calmodulin-interacting protein 111 isoform X1 741 916 - -
Mupr2628g00002 1047 CDD RecA-like_CDC48_r2-like 755 914 - -
Mupr2628g00002 1047 Gene3D - 741 992 IPR027417 -
Mupr2628g00002 1047 FunFam Calmodulin-interacting protein 111 586 744 - -
Mupr2628g00002 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 742 993 IPR027417 -
Mupr2628g00002 1047 Pfam ATPase family associated with various cellular activities (AAA) 784 915 IPR003959 GO:0005524|GO:0016887
Mupr2628g00002 1047 Pfam ATPase family associated with various cellular activities (AAA) 455 584 IPR003959 GO:0005524|GO:0016887
Mupr2628g00002 1047 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 642 IPR027417 -
Mupr2628g00002 1047 MobiDBLite consensus disorder prediction 1 38 - -
Mupr2628g00002 1047 PANTHER AAA-FAMILY ATPASE 69 1005 - -
Mupr2628g00002 1047 FunFam spermatogenesis-associated protein 5-like protein 1 917 1000 - -
Mupr2628g00002 1047 Gene3D - 587 731 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2628g00002 Mupr-Chr2628 17246 26120 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2628g00002 10 1016 Calmodulin-binding Proteins AT3G56690 55.931 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2628g00002 - - gmx:100788600 1716.82