Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2628g00001 GTGTTGGGTGTGAATCTGTGTTTAGATGAAAAGGTATCTTTCACCTTCTTGAATGGGTGCAATTTCTTAGGTGAAGGGGTAGTGGGGGGAGGGAAACAGCAGAAGAAGAAAGGTGTAGTAGATGGAAAGAACCGCAGGGTTTTAGGTGATATTGGGAATTTGGCCAATTTAAGAGGAGTTGAGGTCAATCCCAATCGCCCCATCACAAGGAGTTTCGGTGCCCAACTACTTGCCAATGCGCAAGCAGCATCTGATGAAAATAACAAGAAACAGGCTTGTGCCAATGTTGTGCCCAAAACAGTGGCGGGTCAGAAGAAGAAAGTCACTGTAAAAGCTAAGCCCGACAAAGCCATTCACATTGAAGCTAGCCCAGACAAGAAAAAGGAAGGACATGCCTACTCCAAGAAGAAATCACGCGCTCTTACTTCTGTGCTCACAGCTCGAAGCAAGAGTGATGTTCTATCGCAGGCAGCATGTGGTATAACTAAAAAACCGAAGGAGCAGGTTATTGACATTGATGCTGGTGATGTTGACAACGAGCTTGCTGCTGTTGAATATATCGATGACATTTACAAGTTCTATAAGCTTGTTGAGAAGGAGAGCCGGCCCCATGACTACATAGACTCACAACCTGAGATAAATGAAAGGATGAGAGCTATACTTGTTGATTGGCTCATAGATGTCCACACCAAGTTTGACCTTTCTGCTGAGACCCTTTACTTGACCATCAATATAATTGACCGCTTCCTAGCAGTCAAGACTCTTCCAAGGAGGGAACTGCAATTGGTTGGCGTCAGTGCCATGCTCATAGCAGCCAAGTATGAAGAAATCTGGCCCCCAGAGGTTAATGACTTTGTCTGCCTCTCAGACAGGGCTTACACTCATGAACAGATACTGGTCATGGAGAAAATCATACTGGGCAAGCTGGAGTGGACTTTGACTGTGCCTACACCCTTTGTTTTCCTAGTTCGTTTTATCAAGGCATCAGTTCCAGATCAGGAGTTGGAAAACATGGCCCATTTTCTGTCTGAGTTGGGAATGATGAATTATGCCACCTTAATATATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGTACTCTGAATAAGGCTCCCCTTTGGAATGAGACACTTAAGCTGCACACTGGTTACTCACAAGAACAACTTATGGATTGTGCTAGATTATTGGTGAGCTTCCACTCCACGGTTGGGAATGGAAAGCTTAAGGTTGTGTATGGAAAGTATTCTGATCCTCACAAAGGAGCAGTTGCTATGTTCCCACCAGCTAAAAATCTTTTGCCTGAAAGTGGTGAAGCAGTAGTAGGGGGAGGAAAACAGCAGAAGAAGAACGGTGTAGCAGATGGAAGGAACCGCAAGGCTTTAGGTGATATTGGGAATTTGGCCAATCTAAGAGGAGTTGAGGTCAAACCCAATCGCCCCATCACAAGGAGTTTTGGTGCCCAACTACTTGCCAATGCGCAAGCAGCAGCAGTTGTTGAAAACAACAAGGCAGCATGTGGTATAACTAAAAAACCGAAGGAGCAGGTTATTGACATTGATGCTGGTGATGTTGACAACGAGCTTGCTGCTGTTGAATATATCGATGACATTTACAAGTTCTATAAGCTTGTTGAGAACGAGAGCCGGCCCCATGACTACATAGACTCACAACCTGAGATAAATGAAAGGATGAGAGCTATACTTGTTGATTGGCTCATAGATGTCCATACCAAGTTTGACCTTTCTGCTGAGACCCTTTACTTGACCATCAATATAATTGACCGCTTCCTAGCAGTCAAGACTGTTCCAAGGAGGGAACTGCAATTGGTTGGCGTAAGTGCCATGCTCATGGCAGCCAAGTATGAAGAAATCTGGCCCCCAGAGGTTAATGACTTTGTCTGCCTCTCAGACAGGGCTTACACTCATGAACAGATACTGGTCATGGAGAAAATCATACTGGGCAATCTGGAGTGGACTTTGACTGTGCCTACACCCTTTGTTTTCCTAGTTCGTTTTATCAAGGCATCAGTTCCAGATCAGGAGTTGGAAAACATGGCCCATTTTCTGTCTGAGTTGGGAATGATGAATTATGCCACCTTAATATATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTTGCAGCTAGATGCACTCTGAATAAGGCTCCCCTTTGGAATGAGACACTTAAGCTGCACACTGGTTACTCAGAAGAACAACTTATGGATTGTGCTAGATTATTGGTGAGCTTCCACTCCAATATTGGGAATGGAAAGCTGAAGGTTGTGTACAGAAAATATTCAGATCCTCAGAAAGGAGCTGTTGCTGGGTTCCCACCAGCTAAATATCTTCTATCCCAACAGAGTTAA 2379 0.4472 VLGVNLCLDEKVSFTFLNGCNFLGEGVVGGGKQQKKKGVVDGKNRRVLGDIGNLANLRGVEVNPNRPITRSFGAQLLANAQAASDENNKKQACANVVPKTVAGQKKKVTVKAKPDKAIHIEASPDKKKEGHAYSKKKSRALTSVLTARSKSDVLSQAACGITKKPKEQVIDIDAGDVDNELAAVEYIDDIYKFYKLVEKESRPHDYIDSQPEINERMRAILVDWLIDVHTKFDLSAETLYLTINIIDRFLAVKTLPRRELQLVGVSAMLIAAKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGKLEWTLTVPTPFVFLVRFIKASVPDQELENMAHFLSELGMMNYATLIYCPSMVAASAVFAARCTLNKAPLWNETLKLHTGYSQEQLMDCARLLVSFHSTVGNGKLKVVYGKYSDPHKGAVAMFPPAKNLLPESGEAVVGGGKQQKKNGVADGRNRKALGDIGNLANLRGVEVKPNRPITRSFGAQLLANAQAAAVVENNKAACGITKKPKEQVIDIDAGDVDNELAAVEYIDDIYKFYKLVENESRPHDYIDSQPEINERMRAILVDWLIDVHTKFDLSAETLYLTINIIDRFLAVKTVPRRELQLVGVSAMLMAAKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKIILGNLEWTLTVPTPFVFLVRFIKASVPDQELENMAHFLSELGMMNYATLIYCPSMVAASAVFAARCTLNKAPLWNETLKLHTGYSEEQLMDCARLLVSFHSNIGNGKLKVVYRKYSDPQKGAVAGFPPAKYLLSQQS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2628g00001 792 Pfam Cyclin, C-terminal domain 316 432 IPR004367 -
Mupr2628g00001 792 Pfam Cyclin, C-terminal domain 667 782 IPR004367 -
Mupr2628g00001 792 FunFam G2/mitotic-specific cyclin-1 311 428 - -
Mupr2628g00001 792 SUPERFAMILY Cyclin-like 529 664 IPR036915 -
Mupr2628g00001 792 Gene3D - 554 665 - -
Mupr2628g00001 792 Gene3D - 203 314 - -
Mupr2628g00001 792 Gene3D - 540 779 - -
Mupr2628g00001 792 CDD CYCLIN_AtCycB-like_rpt1 517 662 - -
Mupr2628g00001 792 SUPERFAMILY Cyclin-like 315 434 IPR036915 -
Mupr2628g00001 792 ProSitePatterns Cyclins signature. 218 249 IPR006671 -
Mupr2628g00001 792 FunFam G2/mitotic-specific cyclin 202 310 - -
Mupr2628g00001 792 ProSitePatterns Cyclins signature. 569 600 IPR006671 -
Mupr2628g00001 792 SMART cyclin_7 574 658 IPR013763 -
Mupr2628g00001 792 SMART cyclin_7 671 753 IPR013763 -
Mupr2628g00001 792 SMART cyclin_7 320 402 IPR013763 -
Mupr2628g00001 792 SMART cyclin_7 223 307 IPR013763 -
Mupr2628g00001 792 SUPERFAMILY Cyclin-like 178 313 IPR036915 -
Mupr2628g00001 792 SUPERFAMILY Cyclin-like 666 786 IPR036915 -
Mupr2628g00001 792 CDD CYCLIN_AtCycB-like_rpt1 166 311 - -
Mupr2628g00001 792 Gene3D - 189 428 - -
Mupr2628g00001 792 CDD CYCLIN_AtCycB-like_rpt2 316 432 - -
Mupr2628g00001 792 PANTHER CYCLINS 137 425 IPR039361 -
Mupr2628g00001 792 FunFam G2/mitotic-specific cyclin-1 662 779 - -
Mupr2628g00001 792 SMART Cyclin_C_2 667 784 IPR004367 -
Mupr2628g00001 792 SMART Cyclin_C_2 316 433 IPR004367 -
Mupr2628g00001 792 FunFam G2/mitotic-specific cyclin 553 661 - -
Mupr2628g00001 792 CDD CYCLIN_AtCycB-like_rpt2 667 783 - -
Mupr2628g00001 792 Pfam Cyclin, N-terminal domain 540 664 IPR006671 -
Mupr2628g00001 792 Pfam Cyclin, N-terminal domain 189 313 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2628g00001 Mupr-Chr2628 4752 14947 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2628g00001 457 745 Core Cell Cycle Gene Families AT3G11520 56.484 5.64e-126 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2628g00001 K21777 - gmx:547919 651.744