LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2600g00005	ATGGCCAACCTGCTTCTCCAACTGTTCCCTGTGTTGCTGTTCCTTCTGATCCCAGTTTCATCTCAGCCTAATCAGATCTTCTTTAATGGATTCAGGGGTGTGGGAAGCAACAACATAACCCTGAATGGAGTAGCGGAGATAGATCAAAATGGGGCACTGAAGCTCACAAATGATTCAAGTAAAGTAATGGGCCATGCTTTTTATCCCACTCCTTTTCAGTTGAAGAACTCTAGCAATGGTAAAGCTTTCTCCTTTTCTTGCTCTTTTGCCTTGGCTATTGTTCCTGAGTATCCAAAGCTAGGAGGGCATGGCCTTGCTTTTACAATTGCAACTTCTAAGGATCTGAAGGCTCTCCCAAGCCAGTACCTTGGTCTTCTTAACTCAAGTGACATAGGGAACTTCTCCAACCACCTCTTTGCTGTTGAGTTTGACACAGCCCAGGATTTTGAGTTTGGGGACATCAATGACAACCATGTTGGAATTGACATCAACAGCTTGGCCTCCAATGCTTCTGCCCCTGCAGGTTACTACACTGGGGAGGATGATGCTTCAACCAAACAGAATCTCACTCTCAAAAGTGGTCAACCCATTCTAGCTTGGGTTGATTATGATGCTGCTCAAAGTGTTGTCAATGTCACAATTGCTCCATCTTCCACCAAACCCCAAAGGCCACTCTTGTCATTCCCTGTGGATCTTTCACCAATCCTTAAGGATTCAATGTATGTTGGGTTCTCTGCATCAACAGGGCTGCTTGCCAGCTCCCACTACATCTTGGGGTGGAGCTTTAACATCAATGGACCAGCTCCACCCCTTGATCACTTTTCCCTCCCTTATCTTCCAGGGCCAAAGAAGAAACAAACATCTATGATTATAGGGGTTTCTGTCTCTTGTGTTGTTCTTGCATTGTGTGCTGTCTTACTTGGTATTTACATGTACAGAAGATACAAGAATGCTGATGTTGTAGAAGCCTGGGAGCTTGAGATTGGGCCACACAGGTACTCCTACCAAGAGCTCAAGAAAGCAACAAAAGGGTTCAAGGACAAAGAGCTGCTTGGACAAGGTGGGTTTGGGAGTGTTTACAAAGGAACATTGCCAAGTTCCAACACCCAAGTGGCTGTCAAGAGAGTTTCTCATGACTCCAGACAAGGCCTGAGGGAATTTGTGTCGGAAATCGCCAGCATAGGCCGGCTTCGCCACCGGAATTTGGTCCAGCTGCTGGGGTGGTGTCGCCGCCGCGGAGACCTCCTCCTTGTGTATGATTTCATGGCTAATGGGAGCTTGGACAAGTACTTGTTTGATGAGCCAGAAACAATCCTAAGTTGGGAGCAGAGGTTTAAGGTCATCAAGGATGTTGCCTCAGCCCTTTTGTATCTGCATGAGGGATATGAGCAGGTGGTGATTCATAGAGATGTGAAGGCTAGCAATGTGCTGCTAGATGGTGAACTCAATGGAAGACTAGGGGATTTTGGATTAGCAAGGTTGTATGAACATGGGGCTAATCCAAGCACCACAAGGGTGGTGGGGACCTTGGGCTATTTGGCACCTGAGTTTTCTAGGACAGGGAAGGCCACTCCTAGCTCAGATGTTTTTGCATTTGGTGCAGTTTTACTAGAGGTGGCATGTGGGCTCAGGCCACTTGAGCCTAAGGCATTGCCAGAGGATTTGGTTTTGGTTGATTGTGTGTGGAACAAATTCAAACAAGGGAGGATACTTGACATGGTGGACCCTAAACTAAATGGTGTTTTCAATGAAAGAGAGGTGCTCATGGTGCTGAAACTGGGTCTTCTCTGTTCAAATGGTGCACCCACTGCTAGGCCTACCATGAGACAGGTGGTGGGGTTTCTGGAAGGAGAAGTTGGCTTGCCAGATGAGTTGAGAAAGCCAGGAGAGGTAGGTTACCAGGAGGGTTTTGATGAATTCTTGCACACACTTGAACCTTCTTCCTTTGATCAGTTGAGCCCAAGTTCCTATGTTAGAAATAGAGACATGGATGCTACTAGCTTTCCTTCTTCTACTGATACATCTCTTTTTACTCCCCATGGTAGGGGAGAAACAAGGTGA	2061	0.4668	MANLLLQLFPVLLFLLIPVSSQPNQIFFNGFRGVGSNNITLNGVAEIDQNGALKLTNDSSKVMGHAFYPTPFQLKNSSNGKAFSFSCSFALAIVPEYPKLGGHGLAFTIATSKDLKALPSQYLGLLNSSDIGNFSNHLFAVEFDTAQDFEFGDINDNHVGIDINSLASNASAPAGYYTGEDDASTKQNLTLKSGQPILAWVDYDAAQSVVNVTIAPSSTKPQRPLLSFPVDLSPILKDSMYVGFSASTGLLASSHYILGWSFNINGPAPPLDHFSLPYLPGPKKKQTSMIIGVSVSCVVLALCAVLLGIYMYRRYKNADVVEAWELEIGPHRYSYQELKKATKGFKDKELLGQGGFGSVYKGTLPSSNTQVAVKRVSHDSRQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETILSWEQRFKVIKDVASALLYLHEGYEQVVIHRDVKASNVLLDGELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPEFSRTGKATPSSDVFAFGAVLLEVACGLRPLEPKALPEDLVLVDCVWNKFKQGRILDMVDPKLNGVFNEREVLMVLKLGLLCSNGAPTARPTMRQVVGFLEGEVGLPDELRKPGEVGYQEGFDEFLHTLEPSSFDQLSPSSYVRNRDMDATSFPSSTDTSLFTPHGRGETR	686

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2600g00005	686	PANTHER	-	20	622	-	-
	Mupr2600g00005	686	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	466	478	IPR008271	GO:0004672\|GO:0006468
	Mupr2600g00005	686	Gene3D	Phosphorylase Kinase; domain 1	330	421	-	-
	Mupr2600g00005	686	CDD	STKc_IRAK	351	617	-	-
	Mupr2600g00005	686	Pfam	Legume lectin domain	27	273	IPR001220	GO:0030246
	Mupr2600g00005	686	CDD	lectin_legume_LecRK_Arcelin_ConA	28	266	IPR001220	GO:0030246
	Mupr2600g00005	686	FunFam	L-type lectin-domain containing receptor kinase S.4	422	628	-	-
	Mupr2600g00005	686	Pfam	Protein kinase domain	345	547	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2600g00005	686	ProSitePatterns	Protein kinases ATP-binding region signature.	351	374	IPR017441	GO:0005524
	Mupr2600g00005	686	SUPERFAMILY	Concanavalin A-like lectins/glucanases	28	284	IPR013320	-
	Mupr2600g00005	686	SMART	serkin_6	345	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2600g00005	686	MobiDBLite	consensus disorder prediction	660	686	-	-
	Mupr2600g00005	686	Gene3D	-	25	270	-	-
	Mupr2600g00005	686	Gene3D	Transferase(Phosphotransferase) domain 1	422	627	-	-
	Mupr2600g00005	686	FunFam	L-type lectin-domain containing receptor kinase S.4	22	270	-	-
	Mupr2600g00005	686	SUPERFAMILY	Protein kinase-like (PK-like)	327	628	IPR011009	-
	Mupr2600g00005	686	ProSiteProfiles	Protein kinase domain profile.	345	615	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2600g00005	686	FunFam	Lectin-domain containing receptor kinase A4.3	330	421	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2600g00005	Mupr-Chr2600	13608	15668	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2600g00005	19	685	Receptor kinase-like Gene Family	AT3G55550	58.763	0.0	766

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Mupr2600g00005		Pkinase	3.2e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2600g00005	-		-	gmx:100801247	1188.33