LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2593g00007	ATGAATCGTCCTTTCAGATATTTAGGCGAGAGCAACTCGTCCACCGACTCCGCCGTCGTTGATTCCGATTTCGTCGTCATCCTCGCCGCCCTCCTCTGCGCTCTCATCTGCGTCCTTGGCCTCGTCGCCGTCGCCCGCTGCGGCTGCCTCAGCCGCCTCCGCCTCTCCTCTGCTGCCACTCCGCAGCCTCCTCCCGCCGCCGCCAACAAAGGCGTCAAGAAGAAGGTCCTGCGCTCCCTCCCCAAACACACCGCCACCGCCGAATCCGCGGTGAAATTTGCCGATTGCGCGATCTGTCTTACGGAATTCGCCGCCGGAGACGAAATCCGAGTGCTGCCTCAGTGCGGACATGGCTTCCACGTGAGCTGCATCGACGCCTGGCTCAGGTCGCATTCCTCGTGTCCGTCGTGTCGTCAGATTCTCGTGGTTTCTCGCTGCGACAAGTGCGGCGGGATCCCTGCTCCGGCGAGCTCGAGCACCACCGCGCCGCCGCCGCCGCCAGACTGCGAGGCTGGATTCAAGCTAAGGGAGAACGACGCCAATAGGATAGAAAAAAGGTGA	561	0.6257	MNRPFRYLGESNSSTDSAVVDSDFVVILAALLCALICVLGLVAVARCGCLSRLRLSSAATPQPPPAAANKGVKKKVLRSLPKHTATAESAVKFADCAICLTEFAAGDEIRVLPQCGHGFHVSCIDAWLRSHSSCPSCRQILVVSRCDKCGGIPAPASSSTTAPPPPPDCEAGFKLRENDANRIEKR	186

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2593g00007	186	MobiDBLite	consensus disorder prediction	172	186	-	-
	Mupr2593g00007	186	Pfam	Ring finger domain	95	138	IPR001841	-
	Mupr2593g00007	186	SUPERFAMILY	RING/U-box	77	144	-	-
	Mupr2593g00007	186	MobiDBLite	consensus disorder prediction	154	186	-	-
	Mupr2593g00007	186	ProSiteProfiles	Zinc finger RING-type profile.	96	138	IPR001841	-
	Mupr2593g00007	186	CDD	RING-H2_EL5-like	95	138	-	-
	Mupr2593g00007	186	SMART	ring_2	96	137	IPR001841	-
	Mupr2593g00007	186	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	62	142	IPR013083	-
	Mupr2593g00007	186	PANTHER	RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED	14	150	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2593g00007	Mupr-Chr2593	47244	48327	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2593g00007	5	149	C3H Transcription Factor Family	AT1G20823	66.038	6.39e-65	196

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2593g00007	-		-	pvu:PHAVU_009G007400g	286.574