Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr258g00001 ATGGCGGCTTTCACTTCCCTGTTTCCTTTTGCCAAAGTAATCGTATTGTTACTTTCAGTTTCATCGGCAACTGACACCATTACCGGCTCGCACTCCCTTCCTGATGGCACTACCTTGGTCTCTAAAGATGGAACTTTCGAAATGGGTTTCTTCAGTCCAAGCAATAATATCACCACCACAAACCGCTACCTTGGAATATGGTACAAAATAGACCCAGTTAGAACCGTTGTTTGGGTTGCCAACCGTGAAAACCCAGTTAAGGATAATTCCAGCAAGTTGAGCATAAGCAGAGAAGGAAAACTTGTGATCCTCAGCAAGGACAATACTCCTGTTTGGTCAGCAAACTCAAGTGAAGTAACAAAAGCAGAGAGTCCAATTGTTCAGCTTTTAGACTCAGGGAACTTGGTACCAAGAGATGAGAAAGATTCAAATCCACAAAACTACTTGTGGCAGAGCTTTGACTACCCTTGTGATACTTTTCTGCCAGGAATGAAGATTGGAAGGAACCTTAAGACGGGGCTTAACTGGAGTTATACGGCGTGGAAGAACTGGGATGACCCTTCACCAGGGGACTTCACTTGGGGTATGGTGCTTAACACACTTGAATTGGTTATGTGGAAAGGTTCTAGTGAGTATCATAGGGGTGGCCCTTGGAATGGTGTTAGATTCAGTGGCAAAAGCACTCCCCTTTTTAACTTAGAATTTGTGTCCACTCATGATGAAGTTTACTATATAAATAACCTCAAGAATAAGTCATTTATTACGAGAGTTGTTTTGAACCAATCCCTTTATTCTCGCCGGCGCTATAATAGGATTGAAGAGAACAAAACTTGGAGCCTTTATTCATCGGTGCCTGGTACCAGTTGTGACAAATACAATCTTTGTGGTCCCTATGCGAATTGTATCATGAGTGAGTCACTAACCTGCCAGTGTTTAACTGGGTTCAAGTCAAAACCAGTTCAAAATAACGAGGCATTGGTTTGGAGCCAAGGCTGTGTGCCTAATGAACCATGGAGCTGTGTGGACAAAAGCAAAGTCGGTTTTAAGACATTTAGTGGGTTGAAATTGCCAGATACTACAAGGTCTTGGGTTAATGGAACTTTGACACTTGAGGATTGCAAGGCTAAATGCTTGGAAAATTGTTCTTGCACTGCATATACAAATTTAGATATCAGAGATGGTAGTGGTTGCATCAATTGGTTTGGAGCTTTGCTTGATTTAAAGGTGGCTCCACTTCCCGGGCAAGATCTATTTATTAAAATGGATGCTTCAGAAACTGATGAAAGGGGAGGGCATAAGAGAATGGTGGCAGTGGTGATTCCAGTTATTCTCTTGGTCTTTGTGATTGTCTCCATTTTCACATATATTTACTGGCGGAAAAGAAAGCTTAGAGAAAACACCTCAGAAGAAAAGAAAGATGAAGGCTGTGAAGAAGACTTAGAGCTTCCTTTCTTTGATTTTGCTACAATAGTTCGTGCCACTGATGACTTCTCAAGTGACAAGAGGCTTGGCCAAGGTGGTTTCGGACCTGTGTATAGGGGTACACTAGCAGATGGACAAGAGATTGCTGCCAAGAGGCTTTCAAATAATACTGGACAAGGAACGAAAGAATTCAAGAATGAAGTTATATTGTGTGCTAAACTTCAGCACCGAAATCTTGTTAAAGTTCTCGGTTGTTCCATCCAAGGAGTTGAAAAAGTGCTCATCTATGAATACATGCCTAATAAAAGCCTAGATTCCATTCTCTTTGGTACGTTCCTCAGCAACCTGAAGAACTTCATTTGTTTCTTGTCTAGACTAATTCAACTAGAAAATTTGACAGACTCTTCTATCAGTGGACTCCTAGACTGGTCTAAGCGCTTTAACATTATATTTGGAATTGCTCGGGGACTTCTTTATCTTCATCAAGATTCTACATTAAGAATCATTCATAGAGACATGAAAGCAAGTAATATTCTACTAGATAGTGAATTGAATCCAAAAATTTCAGATTTTGGTGTGGCACGGATGTGTAGTGGAAATCAAACAGAAGGAAGGACAAAAATGGTGGTTGGAACTTAG 2061 0.4095 MAAFTSLFPFAKVIVLLLSVSSATDTITGSHSLPDGTTLVSKDGTFEMGFFSPSNNITTTNRYLGIWYKIDPVRTVVWVANRENPVKDNSSKLSISREGKLVILSKDNTPVWSANSSEVTKAESPIVQLLDSGNLVPRDEKDSNPQNYLWQSFDYPCDTFLPGMKIGRNLKTGLNWSYTAWKNWDDPSPGDFTWGMVLNTLELVMWKGSSEYHRGGPWNGVRFSGKSTPLFNLEFVSTHDEVYYINNLKNKSFITRVVLNQSLYSRRRYNRIEENKTWSLYSSVPGTSCDKYNLCGPYANCIMSESLTCQCLTGFKSKPVQNNEALVWSQGCVPNEPWSCVDKSKVGFKTFSGLKLPDTTRSWVNGTLTLEDCKAKCLENCSCTAYTNLDIRDGSGCINWFGALLDLKVAPLPGQDLFIKMDASETDERGGHKRMVAVVIPVILLVFVIVSIFTYIYWRKRKLRENTSEEKKDEGCEEDLELPFFDFATIVRATDDFSSDKRLGQGGFGPVYRGTLADGQEIAAKRLSNNTGQGTKEFKNEVILCAKLQHRNLVKVLGCSIQGVEKVLIYEYMPNKSLDSILFGTFLSNLKNFICFLSRLIQLENLTDSSISGLLDWSKRFNIIFGIARGLLYLHQDSTLRIIHRDMKASNILLDSELNPKISDFGVARMCSGNQTEGRTKMVVGT 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr258g00001 686 FunFam Os07g0541700 protein 602 686 - -
Mupr258g00001 686 CDD PAN_AP_plant 339 420 - -
Mupr258g00001 686 SUPERFAMILY Protein kinase-like (PK-like) 480 686 IPR011009 -
Mupr258g00001 686 SMART blect_4 30 156 IPR001480 -
Mupr258g00001 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 642 654 IPR008271 GO:0004672|GO:0006468
Mupr258g00001 686 Gene3D - 18 153 IPR036426 -
Mupr258g00001 686 Pfam D-mannose binding lectin 75 182 IPR001480 -
Mupr258g00001 686 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 187 IPR036426 -
Mupr258g00001 686 Gene3D Transferase(Phosphotransferase) domain 1 600 686 - -
Mupr258g00001 686 SMART ntp_6 343 421 IPR003609 -
Mupr258g00001 686 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 460 572 - -
Mupr258g00001 686 Pfam S-locus glycoprotein domain 214 318 IPR000858 GO:0048544
Mupr258g00001 686 ProSiteProfiles Protein kinase domain profile. 497 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr258g00001 686 CDD B_lectin 30 156 IPR001480 -
Mupr258g00001 686 Gene3D Phosphorylase Kinase; domain 1 458 572 - -
Mupr258g00001 686 Pfam PAN-like domain 342 407 IPR003609 -
Mupr258g00001 686 ProSiteProfiles PAN/Apple domain profile. 340 422 IPR003609 -
Mupr258g00001 686 SMART serkin_6 497 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr258g00001 686 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
Mupr258g00001 686 ProSiteProfiles Bulb-type lectin domain profile. 24 150 IPR001480 -
Mupr258g00001 686 Pfam Protein tyrosine and serine/threonine kinase 500 675 IPR001245 GO:0004672|GO:0006468
Mupr258g00001 686 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 680 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr258g00001 Mupr-Chr258 3947 6493 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr258g00001 431 686 Receptor kinase-like Gene Family AT4G04570 46.484 1.47e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mupr258g00001 PK_Tyr_Ser-Thr 9.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr258g00001 - - gmx:100790436 767.303