Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2580g00002 CGGTCCATAATTGGTTTTCGCCATATTTTCTCACGTGCTCCGGTCAAATTCTCATGCTTCCAAACTTCAATATCCAACTACTTCCTCACACTCTCACTACCCACTAAGTTCCTGCCATGTCCACAAACTTTTCAGGCAATGGAGACTCCGAAGCCCTCCTTCGCCGACCTCTCTTGTCCCAAAGATCCACCGTTAATTCGACGTCCCAGGTTGCTATTGTCGGTGCCAATGATTTTCGAGAACGAGTTCTTCAAGCAGGACTGGAGGAGCAGAGGGAAGGCGCAGATATTTCAATACATTTTCATGAAGTGGCTCTTGTGCTTTCTCGTTGGCATGATAGTTTGCCTTGTTGGCTTCTGCAACAATCTCGCCGTTGAGAATCTCGCCGGCATCAAGTTTGTTGTCACGTCCAATATGATGTTGGAGAGGAGGTTTCTGTTGGCCTTTTTTATATTTTTTATTTCGAATTTGTGTCTCACGCTTTTTGCCTCCACGATCACGGCTTTGATAGCACCTACTGCCACGGGTTCAGGTATACCGGAGGTGAAGGCTTACCTGAATGGTGTGGATGCACCTGGAATATTTACTGTACGAACTCTCTTTGTTAAGATTATTGGAAGCATTACAGCAGTGTCAGCATCACTTCTTATCGGGAAGGCAGGGCCTATGGTGCATACAGGTGCATGTGTGGCAGCATTGTTAGGTCAGGGTGGGTCGAAGAGATACAGGTTAACGTGGAAATGGTTACGGTTTTTTAAGAATGACCGAGATCGGAGAGATCTAATAATATGTGGATCAGCAGCTGGAATGGCTGCTGCCTTCCGTTCCCCTGTTGGTGGTGTGTTGTGGAGAGGTGCCCTTCTGTGGAGAGCTTTCTTCACAGCAGCAATAGTTGCAATTTTGCTTCGTGCCATGATTGATTTGTGTTTAAGTGGTAAATGTGGGTTATTTGGTAAAGGGGGACTGATAATGTTTGATGCATATTCAGCAAGTATTTCATATCATTTGGTGGATGTTCCTCCTGTGTTTATTCTTGGTGTTATAGGAGGGATTCTTGGAAGCTTATTTAATTTGATATTGAGCAAAGTTCTTCGCATATACAATTTTATCAATGAGAAAGGCACCATTTTCAAAATTTTGCTTGCCTGTGTTATCTCCATTTTTACATCCCTTCTTCTTTTTGGATTGCCATGGTTGGCATCTTGCCGACTTTGTCCACCTGATCCATCTGAGCCTTGTCCTACAATAGGCCGGTCTGGTATCTACAAGAAATTCCAGTGCCCTCCTAATCACTACAATTCACTTGCCAGCCTCATTTTCAACACAAATGATGACGCCATTAGAAATCTATTTAGCAAGAATACCGATGACGAGTTTGACTTTAACTCAGTGTTCATCTTTTTCATCACATGCTTTTTTTTAAGTATCTTTAGCTATGGAGTTGTTGCTCCAGCTGGTCTTTTTGTGCCAGTTATTGTGACTGGTGCATCTTATGGGCGCATTGTTGGTATGTTGCTTGGCAAAAAATCCACTCTTAACCATGGTCTTTATGCTGTACTTGGTGCTGCTTCCTTTCTCGGTGGATCCATGAGGACAACAGTTTCTCTGTGTGTAATTATTCTAGAACTGACCAATAACCTGTTATTGCTACCCTTAATCATGATGGTGCTGTTCATATCTAAGACTGTAGCAGATACTTTCAATGCAAATATATATGATATTATAATGAAAGCCAAGGGTTTGCCTTATTTAGAAACTCATGCTGAACCATATATGAGGCAGCTAACAGTTGGCGATGTAGTCACAGGCCCACTTCAGACGTTTAATGGCATTGAGAAGGTTCATAACATAGTTTTTGTTCTCAAAACTACAGGACACAATGGGTTTCCTGTTATTGATGAGCCTCCAACTTCAGAAGCTCCAATTTTATTTGGCATAATTCTTCGCGACCATCTTCTCACGTTGTTGAAGAAGAAAGCTTTTTTGTCCTCACCTATAGCAACAAGTGGTGGTGTCTTCAATGACTTTTCGGCGGATGATTTTGCAAAGAAGGGTTCAAACGAAGGTCTAAAGATAGAGGATATACAGTTATCGGCGGAAGAGATGGACATGTTCATAGATCTACATCCATTTACTAATGCTTCTCCTTATACTGTTGTGGAGACAATGTCACTAGGAAAGGCCCTTACGCTTTTTCGAGAGCTTGGTTTAAGGCATCTGCTAGTGATACCCAAGATCTCCAGTAGATCACCTGTGGTGGGGATACTGACACGGCATGATTTCATGCCAGAACATATATTGAGTTTGCATCCTTTTCTGTTAAGAAACAGTTGGAAA 2337 0.424 RSIIGFRHIFSRAPVKFSCFQTSISNYFLTLSLPTKFLPCPQTFQAMETPKPSFADLSCPKDPPLIRRPRLLLSVPMIFENEFFKQDWRSRGKAQIFQYIFMKWLLCFLVGMIVCLVGFCNNLAVENLAGIKFVVTSNMMLERRFLLAFFIFFISNLCLTLFASTITALIAPTATGSGIPEVKAYLNGVDAPGIFTVRTLFVKIIGSITAVSASLLIGKAGPMVHTGACVAALLGQGGSKRYRLTWKWLRFFKNDRDRRDLIICGSAAGMAAAFRSPVGGVLWRGALLWRAFFTAAIVAILLRAMIDLCLSGKCGLFGKGGLIMFDAYSASISYHLVDVPPVFILGVIGGILGSLFNLILSKVLRIYNFINEKGTIFKILLACVISIFTSLLLFGLPWLASCRLCPPDPSEPCPTIGRSGIYKKFQCPPNHYNSLASLIFNTNDDAIRNLFSKNTDDEFDFNSVFIFFITCFFLSIFSYGVVAPAGLFVPVIVTGASYGRIVGMLLGKKSTLNHGLYAVLGAASFLGGSMRTTVSLCVIILELTNNLLLLPLIMMVLFISKTVADTFNANIYDIIMKAKGLPYLETHAEPYMRQLTVGDVVTGPLQTFNGIEKVHNIVFVLKTTGHNGFPVIDEPPTSEAPILFGIILRDHLLTLLKKKAFLSSPIATSGGVFNDFSADDFAKKGSNEGLKIEDIQLSAEEMDMFIDLHPFTNASPYTVVETMSLGKALTLFRELGLRHLLVIPKISSRSPVVGILTRHDFMPEHILSLHPFLLRNSWK 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2580g00002 779 Pfam CBS domain 715 761 IPR000644 -
Mupr2580g00002 779 PRINTS Plant CLC chloride channel signature 311 318 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mupr2580g00002 779 PRINTS Plant CLC chloride channel signature 77 85 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mupr2580g00002 779 PRINTS Plant CLC chloride channel signature 435 451 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mupr2580g00002 779 PRINTS Plant CLC chloride channel signature 293 303 IPR002251 GO:0005247|GO:0006821|GO:0016020
Mupr2580g00002 779 SMART cbs_1 604 657 IPR000644 -
Mupr2580g00002 779 SMART cbs_1 715 766 IPR000644 -
Mupr2580g00002 779 FunFam Chloride channel ClC3 95 402 - -
Mupr2580g00002 779 SUPERFAMILY Clc chloride channel 81 586 IPR014743 -
Mupr2580g00002 779 Gene3D Clc chloride channel 95 584 - -
Mupr2580g00002 779 SUPERFAMILY CBS-domain pair 587 762 IPR046342 -
Mupr2580g00002 779 Pfam Voltage gated chloride channel 160 565 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 533 552 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 172 189 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 203 222 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 483 503 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 571 585 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 515 531 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PRINTS Chloride channel signature 267 286 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Mupr2580g00002 779 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 78 767 - -
Mupr2580g00002 779 CDD CBS_pair_voltage-gated_CLC_euk_bac 587 764 - -
Mupr2580g00002 779 Gene3D - 585 763 IPR046342 -
Mupr2580g00002 779 ProSiteProfiles CBS domain profile. 711 772 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2580g00002 Mupr-Chr2580 17326 23413 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2580g00002 78 779 Ion Channels AT5G33280 74.262 0.0 1054
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2580g00002 K05016 - gmx:100817901 1246.11