Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2580g00001 ATGGCTATCACTGCGTTATTCTTGGTGCTGTTGCTGCAACTGTCAACAATTTTTGGCTCTGAGGTTGTCTTACAGTCAAAGGATTGTGGCAGTGATTGGGTGGCACATTCATATTCTAGTCATGGTCAGGAACTGTTCTACATAAACGGCAATGTAGTGAACAAGGTTGCTTTCTGTGAGGCTCTCCAATTGTATATTGCCAATGGCTGTGATGTGAAGAACTACTTTGGAAGTGTCAAATGTGTGATGGATGACCCTTTTGTGAGTTTACCTTCAAAGGCAGGGAGGAAACTTCTGCAGAAGGATTTAAGCGGTGAATCCACATCACAAGGGGATTCTAAGTCTGTGTCAACCCACGTTGTTGGTCTTTATGCAAGTGGAGCTTTGTTGGTTTGTTGTATTGTTCTTTGTCCTTGTTTCTTTGGCAAGAGACGGGAAGCAACTTCTCATGCTGTTCTGACCAAGGACCCAAATTCAATGGATTCGGTTTCCTCCTTCGATGCCTCCGTTACTGATAAGATTCCGGCCAGTCCCCTTCGGGTGCCACCTAGTCCATCAAGATTCTCAATGTCTCCAAAACTCAGTAGACTTCAATCATTGCATCTCAATCTGAACCAGGTTACAAGAGCTACCCATAACTTCTCAGAAACCTTACAAATAGGAGAAGGAGGTTTTGGAACTGTCTACAAGGCCAAGTTAGAAGATGGCCTAGTTGTGGCTGTAAAACGAGCAAAAAGGGAACATTTTGATAGTTTGAGAACAGAATTCAGCAGTGAAGTTGAACTTTTGGCCAAAATTGATCATAGAAACCTGGTGAAGCTACTAGGTTATATTGACAAAGGAAATGAACGTCTTCTTATTACAGAGTATGTGCCAAATGGTACCCTTAGAGAACATTTGGATGGTCTGCGTGGAAAAATCCTAGACTTCAATCAGCGCCTTGAAATTGCAATTGATGTTGCTCATGGCTTGACCTATCTGCATCTGTATGCCGAAAAGCAAATTATCCATAGAGATGTGAAATCATCCAACATTCTTCTGACAGAAAGCATGCGAGCTAAAGTTGCTGATTTTGGATTTGCAAGGCTAGGGCCAGTGAACACTGATCAGACACACATTTCTACCAAAGTGAAGGGAACAGTTGGTTATTTGGACCCTGAGTATATGAAAACATACCAACTCACTCCCAAAAGTGACGTTTACTCATTTGGAATTTTGCTTTTAGAAATTGTGACAGGCCGCCGCCCTGTCGAGTTGAAGAAAACAGTTGAAGAGCGGGTTACACTCAGATGGGCCTTCAGGAAGTATAATGAAGGAAATGTAGTGGAACTGGTGGATCCTTTAATGGAAGAAGCTGTAAACGCAGATGTTCTGATGAAGATGCTTGATTTGGCATTTCAATGTGCAGCACCTGTTCGAGCAGATAGACCTGACATGAAATCAGTGGGAGAGCAATTGTGGGCTATAAGGGCAGATTACCTCAAGAGTGCAAGGAGATAA 1500 0.4273 MAITALFLVLLLQLSTIFGSEVVLQSKDCGSDWVAHSYSSHGQELFYINGNVVNKVAFCEALQLYIANGCDVKNYFGSVKCVMDDPFVSLPSKAGRKLLQKDLSGESTSQGDSKSVSTHVVGLYASGALLVCCIVLCPCFFGKRREATSHAVLTKDPNSMDSVSSFDASVTDKIPASPLRVPPSPSRFSMSPKLSRLQSLHLNLNQVTRATHNFSETLQIGEGGFGTVYKAKLEDGLVVAVKRAKREHFDSLRTEFSSEVELLAKIDHRNLVKLLGYIDKGNERLLITEYVPNGTLREHLDGLRGKILDFNQRLEIAIDVAHGLTYLHLYAEKQIIHRDVKSSNILLTESMRAKVADFGFARLGPVNTDQTHISTKVKGTVGYLDPEYMKTYQLTPKSDVYSFGILLLEIVTGRRPVELKKTVEERVTLRWAFRKYNEGNVVELVDPLMEEAVNADVLMKMLDLAFQCAAPVRADRPDMKSVGEQLWAIRADYLKSARR 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2580g00001 499 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 96 488 - -
Mupr2580g00001 499 Gene3D Transferase(Phosphotransferase) domain 1 291 498 - -
Mupr2580g00001 499 ProSitePatterns Serine/Threonine protein kinases active-site signature. 335 347 IPR008271 GO:0004672|GO:0006468
Mupr2580g00001 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 291 499 - -
Mupr2580g00001 499 CDD STKc_IRAK 220 486 - -
Mupr2580g00001 499 Pfam Protein tyrosine and serine/threonine kinase 219 486 IPR001245 GO:0004672|GO:0006468
Mupr2580g00001 499 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 186 290 - -
Mupr2580g00001 499 Gene3D Phosphorylase Kinase; domain 1 185 290 - -
Mupr2580g00001 499 ProSiteProfiles Protein kinase domain profile. 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2580g00001 499 SMART serkin_6 214 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2580g00001 499 SUPERFAMILY Protein kinase-like (PK-like) 195 489 IPR011009 -
Mupr2580g00001 499 ProSitePatterns Protein kinases ATP-binding region signature. 220 242 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2580g00001 Mupr-Chr2580 12551 16019 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2580g00001 199 489 Receptor kinase-like Gene Family AT5G59700 46.048 9.07e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Mupr2580g00001 PK_Tyr_Ser-Thr 7.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2580g00001 - - gmx:100798260 901.738