Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2577g00001 ATGGCTCCTCCCTCAGATATCAATCATCTTTCTCACCCTTGTATATATGGGGACTTTGTTTCTTCATACTCAGAGAGAAAGTCTGGTTTTATGAAATGGTTTGGGAAGATTTTCAAAATTGGGTCAAGTAGAGGAAGGGGTGGTGATCGTCATCTGCAGCAGCCTGTGGAAGAAAACATGGTTTGGCCAGCTCCAGCTAGATCGTTGGATGACCGTGCTAGACCTCAGAAAGAGGAAGAGGATCTGGACCATGCACTTGCACTTTCTTTAAGCGAAGATTTGAAGAGACCAGCTGGATATAGATGGCGAATAGGAGCTGATCAAGATTACGCAAAGGCTCTACAGGATCGCTTGTTCTCATCTGCACATCCTCCATATGCCCCTGTACCTTTTTATCCCCGGGGATATGGTATGCCATCGCATAACAGAATATGTGGAGGGTGCAACCAGGAGATACTCTATGGCAATTGTTTAGGAGTTGGTCATAGTTATTTTCATCCAAATTGCTTTCGGTGTCACTCTTGTCGTTACCCCATTACTGAGCGTGAGATACCAATAAATGCTGCTGGTTTGATTGAGTATAGATGCCACCCCTATTGGAACCAAAAGTATTGTCCATCTCATGAATATGATAATACAGCTCGCTGCTGTAGTTGTGAAAGATTAGAGTCTCGGGGTGAAAGATACTTTAGATTGGAAGATGGAAGGATTTTGTGCTTTGAGTGCATGGAATCTGCTATAACGGACACTGGTGAGTGTCAGCCTCTTTATCATGCTATCAGAGACTATTATGAAGGAATGAATATGAGAATAGATCAACAAGTTCCAATGCTTCTCGTTGGGAGAGAAGCACTTAATGAAGCCATTGTTGGGGAGAAGAATGGTTTCCATCACTTACCAGAAACAAGAGGCTTATGCCTTTCAGAAGAGCAAACTGTCACAAGTGTATATAGATGGCCAAGAATTGGAGGCCATCGATTAATAGGGATGAGATCTCAACCTCAAAAGCTGACTAGAAAATGTGAAGTTACAGCTATTCTTGTTCTCTATGGTCTTCCAAGGTTACTCACAGGTGCTATACTTGCACATGAGTTGATGCATGCATGGTTACGCCTTAAAGGTTACCAAAACCTGAGTCCTGAAGTAGAGGAAGGTATTTGTCAGGTTCTTTCATACATGTGGCTTGATGCAGAGGTGATGTCAGATGCTAGAAGCATGCCATCAACATCAGCATCTTCCTCTTCCTCTTACTCGTACTCATCAAAGAAAGGTGCGAAATCACAAGCTGAAAGTAAATTGGGTGAGTTTTTCATGAACCAGATTGCCAATGATTCTTCCCCAGCTTATGGTGGTGGATTTAGAGCAGCTAATGAAGCTGTGAATAAATATGGTTTGCGTTGTACTCTGGAGCATATTCGTTTGACTGGTCATTTCCCACTGTAA 1443 0.4269 MAPPSDINHLSHPCIYGDFVSSYSERKSGFMKWFGKIFKIGSSRGRGGDRHLQQPVEENMVWPAPARSLDDRARPQKEEEDLDHALALSLSEDLKRPAGYRWRIGADQDYAKALQDRLFSSAHPPYAPVPFYPRGYGMPSHNRICGGCNQEILYGNCLGVGHSYFHPNCFRCHSCRYPITEREIPINAAGLIEYRCHPYWNQKYCPSHEYDNTARCCSCERLESRGERYFRLEDGRILCFECMESAITDTGECQPLYHAIRDYYEGMNMRIDQQVPMLLVGREALNEAIVGEKNGFHHLPETRGLCLSEEQTVTSVYRWPRIGGHRLIGMRSQPQKLTRKCEVTAILVLYGLPRLLTGAILAHELMHAWLRLKGYQNLSPEVEEGICQVLSYMWLDAEVMSDARSMPSTSASSSSSYSYSSKKGAKSQAESKLGEFFMNQIANDSSPAYGGGFRAANEAVNKYGLRCTLEHIRLTGHFPL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2577g00001 480 ProSitePatterns LIM zinc-binding domain signature. 145 179 IPR001781 -
Mupr2577g00001 480 Gene3D Cysteine Rich Protein 139 214 - -
Mupr2577g00001 480 SMART lim_4 144 208 IPR001781 -
Mupr2577g00001 480 Pfam LIM domain 145 190 IPR001781 -
Mupr2577g00001 480 PANTHER PROTEIN DA1-RELATED 2 33 479 IPR045218 -
Mupr2577g00001 480 CDD LIM_DA1 145 197 - -
Mupr2577g00001 480 ProSiteProfiles LIM domain profile. 143 215 IPR001781 -
Mupr2577g00001 480 Pfam Protein DA1 266 475 IPR022087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2577g00001 Mupr-Chr2577 3415 7978 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mupr2577g00001 DA1-like 6.1e-97 CL0126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2577g00001 - - gmx:100798829 900.197