LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mupr2563g00001	ATGGCACTGTCAGCTTTTGCTTTTCAAAGAATGACTGTCTGCTGTGGGAATAGACCCCAACTTCCTGACTCCGTGACAGGCATGCTATTAGAAGCCTCAAGTGAAGTGTACTTGCATCTTGTTCTTGGAAATTCCAATTCAATGGGGACTCCAAGTGGAATAATAGCTTTTCTCAGTTTCACATTCTTCTTGTTTTGGAGCTCCACAAATGCTTTGCTTTCTGCCAAGGGAGTTAACTTTGAAGTGCAAGCTTTAATGGGCATAAAAGATTCTCTAGAGGATCCACATGGTGTTCTAGAAAATTGGGATGGGGATGCAGTTGATCCATGTAGCTGGACTATGGTCACATGTTCTTCTGAAAACTTTGTCATTGGACTGGGCACTCCAAGTCAAAGTTTATCTGGTACTCTATCTGCAAGTATAGGCAACTTAACCAACCTTCAAATTGTGCTTCTACAAAATAACAACATAAGTGGACCAATCCCTTCAGAGCTAGGTAAACTCCCTAAGCTTCAAACCCTTGATCTCTCTAACAACTTCTTCAGTGGGCAGATTCCTCCCTCTCTGGGTCACCTGAGAAGCCTCCAATACTTCATTGTTGGAAATCCTCTTGTTTGTGCCACAGGAAAAGAGCCAAACTGCCATGGCATGACATTGATGCCTATGTCAATGAACTTAAACAATACTGAAGGCAGGCCAAAAACTCATAAAATGGCAATTGCCTTTGGCTTGAGTTTGGGATGTCTCTGCCTCATAGTTCTTGGTTTTGGACTTGTTCTTTGGTGGAGGCACAAACACAACCAACAAGCATTCTTTGATGTTAAAGACCGGCATCATGAGGAAGTCTACCTTGGAAACTTGAAGAGGTTCCAATTCAGAGAACTACAGATTGCTACTAACAACTTCAGCAGCAAAAACATTCTGGGAAAGGGTGGTTTTGGAAATGTCTACAAAGGAGTTCTTCCTGATGGCACTCTTGTAGCTGTGAAGAGGCTTAAAGATGGCAATGCCATTGGAGGGGAGATTCAATTTCAGACCGAAGTTGAAATGATTAGCCTGGCAGTGCACCGACACCTCCTCAGACTCTATGGATTTTGTATGACACCATCAGAAAGGCTTTTGGTTTATCCATACATGTCCAATGGCAGTGTTGCTTCCCGACTCAAGGGTAAGCCAGTGCTGGACTGGGGCACAAGGAAGCACATTGCTTTAGGAGCAGCAAGGGGACTACTGTACCTTCATGAGCAGTGTGATCCAAAGATAATCCATAGGGATGTAAAAGCTGCCAACATTTTGCTTGATGACTATTGTGAAGCTGTAGTTGGAGATTTTGGTTTGGCAAAGCTTTTGGATCACCAAGACTCACATGTCACAACAGCAGTAAGGGGCACTGTGGGGCATATTGCCCCAGAATACCTATCTACAGGACAATCTTCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTACTTGAACTGATCACAGGCCAGAGGGCTCTAGAGTTTGGAAAATCAGCTAACAACAAAGGAGCCATGCTTGATTGGGTAAAGAAAATTCATCAGGAGAAAAAGCTTGAAATGCTAGTAGACAAGGATCTGAAGAACAACTATGATAGGATTGAGCTTGAGGAAATGGTTCAAGTGGCTCTCTTGTGTACTCAGTATCTCCCAGGCCATAGGCCTAAAATGTCTGAAGTGGTACGCATGCTTGAAGGTGATGGACTAGCAGAAAGATGGGAAGCTTCTCAAAGAGTTGACACAAGCAAGTGCAAACCACAAGAGTCCTCTTCATCAGATAGGTACTCTGATCTCACTGATGACTCTTTGTTGTTAGTCCAAGCCATGGAGCTCTCAGGACCCAGGTGA	1869	0.4377	MALSAFAFQRMTVCCGNRPQLPDSVTGMLLEASSEVYLHLVLGNSNSMGTPSGIIAFLSFTFFLFWSSTNALLSAKGVNFEVQALMGIKDSLEDPHGVLENWDGDAVDPCSWTMVTCSSENFVIGLGTPSQSLSGTLSASIGNLTNLQIVLLQNNNISGPIPSELGKLPKLQTLDLSNNFFSGQIPPSLGHLRSLQYFIVGNPLVCATGKEPNCHGMTLMPMSMNLNNTEGRPKTHKMAIAFGLSLGCLCLIVLGFGLVLWWRHKHNQQAFFDVKDRHHEEVYLGNLKRFQFRELQIATNNFSSKNILGKGGFGNVYKGVLPDGTLVAVKRLKDGNAIGGEIQFQTEVEMISLAVHRHLLRLYGFCMTPSERLLVYPYMSNGSVASRLKGKPVLDWGTRKHIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANNKGAMLDWVKKIHQEKKLEMLVDKDLKNNYDRIELEEMVQVALLCTQYLPGHRPKMSEVVRMLEGDGLAERWEASQRVDTSKCKPQESSSSDRYSDLTDDSLLLVQAMELSGPR	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mupr2563g00001	622	MobiDBLite	consensus disorder prediction	582	605	-	-
	Mupr2563g00001	622	SUPERFAMILY	L domain-like	81	205	-	-
	Mupr2563g00001	622	Gene3D	Ribonuclease Inhibitor	77	231	IPR032675	-
	Mupr2563g00001	622	ProSiteProfiles	Protein kinase domain profile.	302	557	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2563g00001	622	Pfam	Leucine Rich repeats (2 copies)	145	186	IPR025875	-
	Mupr2563g00001	622	FunFam	Leucine-rich repeat receptor-like kinase	80	208	-	-
	Mupr2563g00001	622	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	421	433	IPR008271	GO:0004672\|GO:0006468
	Mupr2563g00001	622	Pfam	Protein kinase domain	303	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2563g00001	622	SMART	serkin_6	302	557	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mupr2563g00001	622	FunFam	Somatic embryogenesis receptor-like kinase 1	379	591	-	-
	Mupr2563g00001	622	FunFam	Somatic embryogenesis receptor kinase 1	271	378	-	-
	Mupr2563g00001	622	MobiDBLite	consensus disorder prediction	589	605	-	-
	Mupr2563g00001	622	Pfam	Leucine rich repeat N-terminal domain	81	118	IPR013210	-
	Mupr2563g00001	622	SUPERFAMILY	Protein kinase-like (PK-like)	279	572	IPR011009	-
	Mupr2563g00001	622	Gene3D	Transferase(Phosphotransferase) domain 1	379	591	-	-
	Mupr2563g00001	622	Gene3D	Phosphorylase Kinase; domain 1	271	378	-	-
	Mupr2563g00001	622	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	60	582	-	-
	Mupr2563g00001	622	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mupr2563g00001	Mupr-Chr2563	3605	8136	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mupr2563g00001	56	622	Receptor kinase-like Gene Family	AT5G16000	73.280	0.0	909

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Mupr2563g00001		Pkinase	5.5e-44	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mupr2563g00001	-		-	gmx:100798412	1023.46