Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2562g00015 ATGACTTCCACTAAGAACGAGGTAAACGCCGTTGGCGCCAAAACGGCAAGAGCGTGCGACAGCTGCATAAGAAAGCGAGCGCGTTGGTACTGTGCCGCAGACGACGCATTCCTCTGCCAAGCTTGCGACTCTTCGGTTCACTCCGCTAATCCTTTGGCGCGTAGACACCACCGAGTTCGCTTGAAAATCGTTTCACATAATGATTGTGCTCGAGCGTGGCACAGAGGCTTCACCAAAAAACCCCGAACGCCGCGTCACGCGAACAATAAGCACGCCAACAAGGCTTCGAGCAACCCGTTCGATGTGGTACCCGAAGACACAAACTCAAACGAAGAGAGCGTGGAGCCGGAGCAGCTTCTTTTTAGAGTGCCCGTTTGCGCAACTCCTCCTTCGCATGAACAAGCAACAGGAGTAACCGAAGAAAGCTTATTTCTTAAATCGGAGATTGAAATTGCGGAGTTTGCTGCGGATGTTGAGAGCTTGTTGGGTACGGGTCTAGAGAGTGAGTTTGTGGGAATGGAAGAGTTGGGGTTTGTGGGTAACGAATTGGAGGAGGGATACGCTTCGTGGGAGTGTTGTGTGGGTGGTGGGAACGTGAAGGTGGAGGAGGAGATGAAGGGGAGAGAAGAGGCGTTTGAGTTGGGATTTGATTGTGATGATGATGAGGAGAATGTCGCGTTAACATGTGAAGGGTTGGATGAGAGCAAAGTTGGGGAGATTCATAATAATGGTGGAGAATTCGAAGAGAATGATGAAGCAAAGAGGAAGAAGATACTGTTGTTGCGGTTAGATTATGAGGCTGTAATCACTGCTTGGGCGAGCCAAAAATCTCCGTGGACTACTGGTGATAAACCAGACTTGGGCACTCATCTTTGCTGGCCTCATTGCACGGTACCCTTCATGGGAGCTTGTGGAGTGGAGTTTCACTATCCTTATGGTGAATTATTTGGGTGTCATTCAGCAATGGCAGACGGGGGAAGAGAAGCGAGGGTATCAAGATATAGAGAAAAGCGACGGACAAGGTTGTTCTCGAAGAAAATAAGGTATGAGGTTCGAAAATTGAACGCGGAGAAGCGACCCAGAATGAAAGGGAGGTTTGTAAAGAGGGCTTCCTTTGTGGCACCACCGACTTTTCCTTTGGTAAACAAATAA 1152 0.4913 MTSTKNEVNAVGAKTARACDSCIRKRARWYCAADDAFLCQACDSSVHSANPLARRHHRVRLKIVSHNDCARAWHRGFTKKPRTPRHANNKHANKASSNPFDVVPEDTNSNEESVEPEQLLFRVPVCATPPSHEQATGVTEESLFLKSEIEIAEFAADVESLLGTGLESEFVGMEELGFVGNELEEGYASWECCVGGGNVKVEEEMKGREEAFELGFDCDDDEENVALTCEGLDESKVGEIHNNGGEFEENDEAKRKKILLLRLDYEAVITAWASQKSPWTTGDKPDLGTHLCWPHCTVPFMGACGVEFHYPYGELFGCHSAMADGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRASFVAPPTFPLVNK 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2562g00015 383 MobiDBLite consensus disorder prediction 90 114 - -
Mupr2562g00015 383 SMART bboxneu5 14 61 IPR000315 GO:0008270
Mupr2562g00015 383 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 10 371 - -
Mupr2562g00015 383 ProSiteProfiles Zinc finger B-box type profile. 14 61 IPR000315 GO:0008270
Mupr2562g00015 383 MobiDBLite consensus disorder prediction 75 114 - -
Mupr2562g00015 383 CDD Bbox1_BBX-like 18 61 - -
Mupr2562g00015 383 ProSiteProfiles CCT domain profile. 327 369 IPR010402 GO:0005515
Mupr2562g00015 383 Pfam B-box zinc finger 16 58 IPR000315 GO:0008270
Mupr2562g00015 383 Pfam CCT motif 327 369 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2562g00015 Mupr-Chr2562 55270 57033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2562g00015 5 369 C2C2-CO-like Transcription Factor Family AT1G25440 43.029 2.60e-91 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Mupr2562g00015 CCT 1.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2562g00015 - - vun:114173052 452.595