Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2562g00013 ATGAAAATGAGTTGTAATGGATGTCGCATTCTCCGCAAAGGTTGTAGTGAGGACTGTGTCATAAGGCCATGTCTTGAGTGGATCAACTGTCCTAAGGCTCAAGCCAACGCCACTCTCTTCCTTGCCAAATTCTATGGTCGTGCTGGCTTGGTCAACCTCATCAATGCTGCCCCACAACACCTCCGCCCTGGTGTGTTGAAGTCACTAATGTACGAGGCATGTGGGAGAATTGCAAACCCAACTTATGGCTCATTGGGCTTGTTTTGGACCGGTGAGTGGGCCCAATGCCAAGCTGCTGTTGATGCTGTGCTAAGTGGGGCCCAGATCAATGTCGTGGAATCTTCCCATTCACAGGTAATAGGGGCACGTGGCAACAAGCATGTTCCCTCAGTTCTTGGCATAAGCCACGTGTCCAAAGTAAAAGGAAAAGGTAAGCTCAAGAGGACCGAGAATGTGATCATGCCTAAGCCGCGCGTGGGTTCGGTCAACTCAGTTGCGTTGTGGAAACCGACTTCGAGTCATGACTTAAGAGGATCGAAGGGTGATAATGAGGAAATTATGGAGGCTTTGCTGGTGAGCCAAGACAAGCCGAGCCAAAATGGTGGAGCCAAGCTGGATTTGGAGCTCACCCTTGGCTAG 639 0.5039 MKMSCNGCRILRKGCSEDCVIRPCLEWINCPKAQANATLFLAKFYGRAGLVNLINAAPQHLRPGVLKSLMYEACGRIANPTYGSLGLFWTGEWAQCQAAVDAVLSGAQINVVESSHSQVIGARGNKHVPSVLGISHVSKVKGKGKLKRTENVIMPKPRVGSVNSVALWKPTSSHDLRGSKGDNEEIMEALLVSQDKPSQNGGAKLDLELTLG 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2562g00013 212 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Mupr2562g00013 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 170 - -
Mupr2562g00013 212 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2562g00013 Mupr-Chr2562 41768 43049 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2562g00013 1 211 AS2 family AT3G02550 44.397 5.05e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mupr2562g00013 LOB 2e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2562g00013 - - gmx:100789066 304.293