Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2560g00002 ATGGGGAGTAGGGTTAGGCAGGGGAGGAGATTGCAGAAGATGATGAAGTGCATGTGCCTGAGGGAGCCGTTAAGAGGAGAAGATGAAACGGTTCCTTCGTCGGATTCTCATGCAATCAGGGAGTTTTATTCTTCAACAGCAAGTGGCCGTTCTTTCCTCGGTGGGGAAATTGAGATGGGATCGGATTCTGGCAAGATGGATGAAGCCGAACTGTCCTTGCGTGAGAGTGGCATCTTGGACACTGAGGAAGCTAGAGCTTTGTTAGGAAGAGATGAATATCAGGAAGGGAATATAGAAGCTGCTTTACGTGTTTATGAGACAATAAATATAGGCGCTGTGACTCCCAAGATGAGAATTTCCCTTGCCAAAAGCAGAGAACGCCGTAAGAAACATTCCCATTATTATGCGACTCCTCCAATGTCCATATACACGGCTGGATTATTGTTGGAAGCAATTTTCCTAAAAGCAAAATGTTTGCAGGTTCTAGGGAGGTTTAAAGAAGCTGCCCAAACTTGTAAAGTTATTCTGGACATAGTTGAGTCTTCATCACCTGAAGGCTTGCCTCAAAGTTTTGGCGATGAGTATAAATTGCAGGAGACTTTGAGTAAGGCAGTTGAGTTACTTCCAGAATTGTGGAAACTTGCTGATTCTCCACGTGAAGTTATCTTGTCTTACCGGCGTGCAATCCTTCACCAGTGGAATCTTGATACAAAAATCATAGCAAAAATTCAGAAAGAATTTGTTATTTTTCTTCTATATAGTGGAGGGGAAGCAATCCCCTCAAATCTTCGTTCCCATATGGATAGCTCGTTTGTACCCAAAAACAACTTAGAAGAGGCTATACTTCTTTTAATGATTTTGCTAAGAAAAATATCTCTAAATAAAATTGAGTGGGATCCGTCAATTTTGGACCACCTTTCATTTGCTCTATCTGTTTCAGGGGATTTGTCAGCTTTAGCCAATCAATGGGAAGAATTACTCCCTGGAACTATCAATCGAAGAGAAAGGTACCATGCCCTTGCTCTTTGTTATTATGGCGCAGGTAATGACTTGGTAGCACTGAATCTTCTTAGGAAATTGTTGAGTAGTAAAGAGGACCCAAAACATGTTCCCGCCTTGTTAATGGCTTCCAAGATTTGTTGTGAGCACCCTGATCTTGCAAAAGATGGGGCGAGCTTAGCTCGCAGAGTGCTTGAGAACTTGGATGGAAGATGTAGTCAGTTGGAAAGTCTTGCCAGTTGCTTACTTGGTGTTTCACTTTCAGCACACTCAAAATTTGCCATTTCTAATTCTGAGTTGTTTGAAAGACAATCTGAGGCACTTCATTCACTGGAAACTGCAAGTAAAATGACCAGAATGAGTAACCCCCTTGTAATATACTATTTGAGTTTAGAATGTGCAGAGCAAAGGAAGTTGGATGCTGCACTTCAGTACGCAAAATGCTTTCTAAACTTGGAAGGTGGGTCTAATGTTAAAGGGTGGTTATTGTTAGCCCGGATATTATCAGCTCAAAAACAGTTTTTGGATGCTGAATCTGTTGTCAATGATGCTTTGGATCAGACTGGAATATGGGATCAAGGAGAGTTATTGCGAACTAAAGCTAAATTGCAAATTGCACAGGGTCAGTTGAAGAGTGCCATTGAAACATACACTCAGCTTCTTGCTATTCTCCTAGTTCAGAGGAAGACTTTTGGTTCAAGGAAGAAGCAGTATAAGGACTACATAGATCATGCTAGGAACATGGAAGTGGAAATATGGCATGATCTTGCTTATGTATACATAAGTCTGTCACGGTGGCATGATGCAGAGGTGTGTCTTTCGAAATCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCATGCAATAGGCACAATGTACGAAGCAAAGGGCGGTTACAAAGAGGCTTTAAAAGCTTTTCGTGATGCTTTGGACATTGATCCCGGACATGTCCCTAGCTTGATCTCTACTGCGGTGGTTCTTAGACAGTTCAGTTGTCGATCAAATCCTGCTATCAGAAGTTTTCTGATGGATGCGCTACGGCATGACAGATTTAATGCTTCTGCTTGGTATAATCTTGGCATTTTTCACAAGGATGAGGGTACAATGCTAGAAGCTGCAGAATGTTTTCAGACAACAAACTTTCTTGAAGAATCGGCTCCAGTTGAACCTTTCAGATGA 2181 0.4177 MGSRVRQGRRLQKMMKCMCLREPLRGEDETVPSSDSHAIREFYSSTASGRSFLGGEIEMGSDSGKMDEAELSLRESGILDTEEARALLGRDEYQEGNIEAALRVYETINIGAVTPKMRISLAKSRERRKKHSHYYATPPMSIYTAGLLLEAIFLKAKCLQVLGRFKEAAQTCKVILDIVESSSPEGLPQSFGDEYKLQETLSKAVELLPELWKLADSPREVILSYRRAILHQWNLDTKIIAKIQKEFVIFLLYSGGEAIPSNLRSHMDSSFVPKNNLEEAILLLMILLRKISLNKIEWDPSILDHLSFALSVSGDLSALANQWEELLPGTINRRERYHALALCYYGAGNDLVALNLLRKLLSSKEDPKHVPALLMASKICCEHPDLAKDGASLARRVLENLDGRCSQLESLASCLLGVSLSAHSKFAISNSELFERQSEALHSLETASKMTRMSNPLVIYYLSLECAEQRKLDAALQYAKCFLNLEGGSNVKGWLLLARILSAQKQFLDAESVVNDALDQTGIWDQGELLRTKAKLQIAQGQLKSAIETYTQLLAILLVQRKTFGSRKKQYKDYIDHARNMEVEIWHDLAYVYISLSRWHDAEVCLSKSKAIKLYSASRCHAIGTMYEAKGGYKEALKAFRDALDIDPGHVPSLISTAVVLRQFSCRSNPAIRSFLMDALRHDRFNASAWYNLGIFHKDEGTMLEAAECFQTTNFLEESAPVEPFR 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2560g00002 726 PANTHER PROTEIN NPG1 15 726 IPR043376 -
Mupr2560g00002 726 Gene3D Tetratricopeptide repeat domain 613 714 IPR011990 GO:0005515
Mupr2560g00002 726 Gene3D Tetratricopeptide repeat domain 422 612 IPR011990 GO:0005515
Mupr2560g00002 726 Gene3D Tetratricopeptide repeat domain 148 416 IPR011990 GO:0005515
Mupr2560g00002 726 SMART tpr_5 491 524 IPR019734 GO:0005515
Mupr2560g00002 726 SMART tpr_5 617 650 IPR019734 GO:0005515
Mupr2560g00002 726 SMART tpr_5 149 182 IPR019734 GO:0005515
Mupr2560g00002 726 SMART tpr_5 583 616 IPR019734 GO:0005515
Mupr2560g00002 726 SMART tpr_5 527 560 IPR019734 GO:0005515
Mupr2560g00002 726 SMART tpr_5 687 720 IPR019734 GO:0005515
Mupr2560g00002 726 Pfam Tetratricopeptide repeat 618 649 IPR019734 GO:0005515
Mupr2560g00002 726 SUPERFAMILY TPR-like 333 556 IPR011990 GO:0005515
Mupr2560g00002 726 ProSiteProfiles TPR repeat profile. 617 650 IPR019734 GO:0005515
Mupr2560g00002 726 SUPERFAMILY TPR-like 528 712 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2560g00002 Mupr-Chr2560 8943 13808 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2560g00002 15 726 Calmodulin-binding Proteins AT4G28600 54.545 0.0 729