Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2553g00006 GATATGGACGGCGATAACTGCTTCTTCAACCAATATCAAAGGAATGGTGAAGGAAGTGAGACACAAACAGGGAACATTAACATGGAAGCAACGGTTGGCCAAGGAACAAAGAGGGCCAAAACCTCTTCGGATACTCTGAATCACATTATGTCGGAGAGAAAAAGGAGACAGCAAATGGCTGAGAGATTCATTGCGCTTTCGGCTGTTATACCTGGCTTGAACAAGATAGACAAGGCCTCTGTACTTGGGGAAGCTATTAATCACGTGAAACAGCTCCAAGGACGCATAGCAGTGCTGGAGCAGTGCTGGAGCAGTGCTGGAGCAGTGCTGGAGCAAGAGAGTAAGAAGAAAAGTACCAAGTTGATGATCTTCTCTAAGAAATCTCAATCTCATCCTTGTTCCCCATCATGTGAAAACTCCAATTATTTCTTAGAATCTAATCACGTGCTCCCTCAAGTGGAAGCAATAGGCTTAGAGCTAGAGAAGAAACTACTTATTAGAATCCTTAGTGTGAAACGAAAGGGCATCTTGCTCAAACTACTGGCCTCACTTGAAAACACACATCTTTCTATTATCAGTAGCAGCTTACTGCCATTTGGAAAAAATACTCTCAGCATTACCATTATTACTCAGATGGGTGAGGAATACAACATGACAGTGGAAGAATTGGTGAAAAGCCTGACTCAGGATCTTCGCAATCTCAGTAACCAGCAAGAAAGAGCAAGACTTGATTGCTAG 738 0.4309 DMDGDNCFFNQYQRNGEGSETQTGNINMEATVGQGTKRAKTSSDTLNHIMSERKRRQQMAERFIALSAVIPGLNKIDKASVLGEAINHVKQLQGRIAVLEQCWSSAGAVLEQESKKKSTKLMIFSKKSQSHPCSPSCENSNYFLESNHVLPQVEAIGLELEKKLLIRILSVKRKGILLKLLASLENTHLSIISSSLLPFGKNTLSITIITQMGEEYNMTVEELVKSLTQDLRNLSNQQERARLDC 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2553g00006 245 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 106 IPR036638 GO:0046983
Mupr2553g00006 245 SMART finulus 49 98 IPR011598 GO:0046983
Mupr2553g00006 245 Coils Coil 217 244 - -
Mupr2553g00006 245 PANTHER BHLH TRANSCRIPTION FACTOR 21 231 - -
Mupr2553g00006 245 Pfam Helix-loop-helix DNA-binding domain 47 93 IPR011598 GO:0046983
Mupr2553g00006 245 Gene3D - 39 102 IPR036638 GO:0046983
Mupr2553g00006 245 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 43 92 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2553g00006 Mupr-Chr2553 66894 73845 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2553g00006 34 234 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 39.336 4.49e-37 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr2553g00006 HLH 9.5e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2553g00006 - - gmx:100809351 210.305