Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2553g00005 ATGGAGCAATCATGGGAGAATTGGGCTCTTGAAATGGAAATGGAGGATGATGACAGGGATCTGCTAGAGGGGTGCGACTGCCACACCGAAGAGGAGGAGTTCCTTAGGGAGATCCTGAATCAACCGGCTTTTTCTTCCGAAAGTGAAAGTCAACCTTTCGTCCAGAGCAACTCAACGGCCACGGATGAGATGGTAATCGTAGGGTCCAAATCCAATAGACCTGCGAAAAGTGGTAACCTATCTGATTCATCTCCGAGGACATACATTTTGTCTTTCGACAACTCTACCATGATACCGGCCACACCGGAACCTTTCTCCGCTTTCCAACGGGGAGGGACACGCTCTTCTAAATCTACTTCCACTATGTCCTCCAAAAAACGGACCCTAGACAATCAGAATCCCAAGGCCAGTCAAGGAGTAAAGAGAGGTAGAACAGGTTCCCAGACTGTGGATCACATAATGGCTGAAAGAAAGAGGAGACAGGAACTCACTGAGAGGTTCATAGCACTTTCAGCCACTATTCCTGGATTGAAGAAGACGGACAAGAGTTCTATACTTCACGAAGCAATAAATTATGTGAAGCAACTTCAAGAACGTGTGAGGGAGCTAGAACAGAGAAACAAGAGATGCAAAGAATCAGTGATAATCCTGAAGAAGAGTGATCTGTGTGCAAATGAAGATAGTATATGGACTGAAACAAATTCTGATGATTGGTGTATACATAGACCCAACGAAATGCTCCCTAATGTTGAAGCAAGAGTGATGGATAATGAGGTACTCATTGAGATCCACTGTGAGAAGGAAGATGGTGTTGACCTCAAAATATTGGACCAGATTGAAAATCTTCATCTCTCTGTCACCGCCAGCAGCGTATTGCCCTTTGGGAATTCAACTCTTGGCATTACTATTATTGCTCAGATGGGTGACACGTACAGAATGACGGTAAATGATCTAGTTAAAAACCTAAGGCAAGCGCTGTTGAATCACATGAACATCAATGCCGATCCGTAC 1011 0.4461 MEQSWENWALEMEMEDDDRDLLEGCDCHTEEEEFLREILNQPAFSSESESQPFVQSNSTATDEMVIVGSKSNRPAKSGNLSDSSPRTYILSFDNSTMIPATPEPFSAFQRGGTRSSKSTSTMSSKKRTLDNQNPKASQGVKRGRTGSQTVDHIMAERKRRQELTERFIALSATIPGLKKTDKSSILHEAINYVKQLQERVRELEQRNKRCKESVIILKKSDLCANEDSIWTETNSDDWCIHRPNEMLPNVEARVMDNEVLIEIHCEKEDGVDLKILDQIENLHLSVTASSVLPFGNSTLGITIIAQMGDTYRMTVNDLVKNLRQALLNHMNINADPY 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2553g00005 337 MobiDBLite consensus disorder prediction 100 145 - -
Mupr2553g00005 337 SMART finulus 153 202 IPR011598 GO:0046983
Mupr2553g00005 337 Pfam Helix-loop-helix DNA-binding domain 151 197 IPR011598 GO:0046983
Mupr2553g00005 337 Gene3D - 146 219 IPR036638 GO:0046983
Mupr2553g00005 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 147 196 IPR011598 GO:0046983
Mupr2553g00005 337 MobiDBLite consensus disorder prediction 100 148 - -
Mupr2553g00005 337 PANTHER BHLH TRANSCRIPTION FACTOR 33 329 - -
Mupr2553g00005 337 Coils Coil 186 220 - -
Mupr2553g00005 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 147 215 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2553g00005 Mupr-Chr2553 53943 56874 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2553g00005 138 330 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 46.970 3.71e-47 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mupr2553g00005 HLH 6.7e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2553g00005 - - aprc:113856039 405.986