Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2553g00003 ATGACAAAGTATAAGAAAAGAAAGAAGCTTTTCTTGACATTCCACTGTCTCACTCACTCTCCTTCAATAAGGACACCCCAAATGAATCTTCTTCTTCTTCTCTTCCTTCCTATTTGGCTGCTCAGCATTTCTCTTTCCTCGCCAATTCTTCATGCTGCGTCCTCCATTTCTGTTTCTCAATCTTCTGCAAATGCACAAGCTGAATCTCCAGGAATTCAGGAGGTTAAAATAGTGCACCACCAGAATTTGAATAAGAGATTTATAATTCCACTAGTTGCTTGCTCTGCTCTTCTTGGTGGAGTCTTCCTATTCTTATTATATGTCTGGTTCCGTCGACATAAAATCTTAAGATGCTCCAGTAGTGAAAGCCAAGAAACCATTGAGGCTGCAAAAGGGGAAACCTTAAGCTCAGTTAATGCTAAACTTAACTACTCTAGGATGGCAGATAAGAAGAGTTCAGTTGCTATTTTTGACTATCAGCTGTTGGAGTCTGCAACAAACAGCTTTAGCACAAGTAATATTATGGGTGAGAGTGGTTCTAGAACCGTTTACAGAGCTCGTTTTGATGAACATTTCCAGGCAGCTGTGAAGAAAGCAGATAGTGATGCTGATAGAGAATTCGAGAATGAAGTGAGTTGGTTGAGCAAGATAAGGCATCAGAATATCATAAAACTTATGGGTTATTGTATTCATGGTGAATCAAGGTTTCTTGTTTATGAATTGATGGAGAATGGATCTCTGCAAACTCAATTACATGGGCCTACTCGGGGGTCATCTTTAACTTGGTATCTCAGGTTAAGAATTGCTGTTGATGTTGCCAGAGCATTAGAATATCTCCACGAGCACTCCAATCCTCCTGTGGTTCATAGAGACCTAAGATCTTCTAATGTTCTTCTGGATTCTAACTTTAATGCCAAGTTATCAGATTTTGGATTTGCTATGGTTTCTGGAATGCAACACAAGAACATGAAGATGTCAGGAACTTTAGGATATGTGGCTCCCGAGTACATATCACATGGTAAGCTAACGGATAAGAGCGATGTTTATGCTTTTGGGGTTGTCCTTCTAGAACTCCTAACCGGAAAAAAACCCATGGAGAACATGTCCTCGCACCAATTTCAGTCCCTCGTATCATGGGCCATGCCTCAGCTAACTGACAGATCGAAGCTTCCAAGTATTCTGGATCCTGTTATAAAAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGCGTGCAAGCAGAACCAAGCTATAGGCCACTAATAACAGATGTGTTGCACTCTCTCATCCCTTTGGTACCCGTTGAGCTTGGAGGCTCACTACGAGTTACAGAACCAATCAGCTCAGACAACTCTCGTTGA 1380 0.4116 MTKYKKRKKLFLTFHCLTHSPSIRTPQMNLLLLLFLPIWLLSISLSSPILHAASSISVSQSSANAQAESPGIQEVKIVHHQNLNKRFIIPLVACSALLGGVFLFLLYVWFRRHKILRCSSSESQETIEAAKGETLSSVNAKLNYSRMADKKSSVAIFDYQLLESATNSFSTSNIMGESGSRTVYRARFDEHFQAAVKKADSDADREFENEVSWLSKIRHQNIIKLMGYCIHGESRFLVYELMENGSLQTQLHGPTRGSSLTWYLRLRIAVDVARALEYLHEHSNPPVVHRDLRSSNVLLDSNFNAKLSDFGFAMVSGMQHKNMKMSGTLGYVAPEYISHGKLTDKSDVYAFGVVLLELLTGKKPMENMSSHQFQSLVSWAMPQLTDRSKLPSILDPVIKNTMDLKHLYQVAAVAVLCVQAEPSYRPLITDVLHSLIPLVPVELGGSLRVTEPISSDNSR 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2553g00003 459 FunFam probable receptor-like protein kinase At1g80640 242 440 - -
Mupr2553g00003 459 Pfam Protein tyrosine and serine/threonine kinase 180 402 IPR001245 GO:0004672|GO:0006468
Mupr2553g00003 459 ProSitePatterns Tyrosine protein kinases specific active-site signature. 287 299 IPR008266 GO:0004672|GO:0006468
Mupr2553g00003 459 SUPERFAMILY Protein kinase-like (PK-like) 145 435 IPR011009 -
Mupr2553g00003 459 ProSiteProfiles Protein kinase domain profile. 169 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2553g00003 459 Gene3D Transferase(Phosphotransferase) domain 1 242 440 - -
Mupr2553g00003 459 SMART tyrkin_6 182 435 IPR020635 GO:0004713|GO:0006468
Mupr2553g00003 459 PANTHER OS01G0750732 PROTEIN 54 439 - -
Mupr2553g00003 459 Gene3D Phosphorylase Kinase; domain 1 129 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2553g00003 Mupr-Chr2553 22037 26125 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2553g00003 31 381 Receptor kinase-like Gene Family AT1G80640 46.322 1.87e-107 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Mupr2553g00003 PK_Tyr_Ser-Thr 4.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2553g00003 - - gmx:100811188 719.153