Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2553g00001 ATGGGAGGTCTCGAAGAAATCAAGAAGGAGACAGTCGATCTCGAGCGGATTCCCGTTGATGAAGTGTTCCGAGAATTAAACTGTTCCAAGGAAGGTCTCACAAATGAGGAAGGCCAAAAGAGGTTACAAGAAAGCAAGGTGCTCAAATTCCTGGGTTTTATGTGGAACCCCCTCTCATGGGTCATGGAAGCCGCTGCTATCATGGCCATTGCAATGGCAAATGGAGGGGGTGAGCCACCAGATTGGCAAGACTTTGTGGGAATAATGGTGTTGCTAATTGTCAACTCAACCATTAGTTTTATTGAAGAAAATAATGCGGGCAACGCTGCTGCAGCTCTTATGGCTGGCCTTGCCCCGAAAACAAAGGTTCTGAGAGATGGAAAGTGGTCAGAGCAAGAGGCTGCAATACTTGTACCAGGAGATATAGTGAGCATCAAATTAGGAGACATAATTCCAGCGGATGCTCGTCTGTTGGATGGAGATGCCCTGAAGATAGATCAATCTGCACTGACTGGTGAGTCCTTGCCTGTTACCAAGAACCCTGGTGATGAAGTCTTCTCTGGCTCCACGGTCAAGCAGGGAGAGATTGAGGCTGTTGTCATCGCTACTGGGGTCCACACCTTCTTCGGTAAGGCTGCTCATTTAGTGGACAGCACCAACCAAGTTGGTCATTTCCAAAAGGTGTTGACAGCCATTGGTAACTTCTGCATTTGCTCCATTGCTTTGGGCATGATCATAGAGATTGTTGTCATGTATCCCATTCAGCACCGCAGGTATAGGAGTGGGATTGACAATCTCTTAGTGCTTCTCATTGGAGGGATTCCCATTGCCATGCCAACAGTCTTGTCGGTCACAATGGCTATTGGTTCCCATAGGCTCTCCGAGCAAGGTGCCATCACCAAGAGGATGACAGCCATTGAGGAAATGGCTGGAATGGATGTTTTATGCAGTGACAAAACTGGCACTCTAACACTCAACAAACTCACAGTGGACAAGAGTTTGGTGGAGGTTTTTGCAAGAGACGCTGACAAGGATACTGTAATTCTGTTTGGAGCTAGGGCCTCCAGGGTAGAGAACCAAGATGCAATTGATGCTTGCATTGTTGGAATGTTGGGCGATCCAAAGGAGGCTAGAGATGGCATTACAGAGGTGCATTTCCTCCCCTTTAATCCAGTGGACAAGCGCACAGCCATAACATACATAGACACCGACGGCAACTGGCACAGAGTAAGCAAAGGAGCACCAGAGCAGATTATCGAACTTTGCCACCTTCGGGAAGACGTGAAGAAGAAGGCTCTTTCCATCATTGATAAATTTGCCGATCGCGGTCTTCGTTCCCTTGCCGTTGCCAGACAAGAAGTGCCAGAAAAGAGCAAGGAGAGTGCAGGAGGACCATGGCAGTTTTTGGGTCTATTGCCACTTTTTGACCCACCAAGGCATGACAGTGCTGAGACCATAAGGCGTGCTCTAAATCTTGGAGTGAATGTTAAGATGATCACCGGTGATCAGCTAGCTATTGGTAAGGAAACTGGTCGCAGGCTTGGCATGGGAAGCAACATGTACCCTTCATCCTCTCTCCTTGGTGAGCACAAAGATGAGTCCATTGCTGCCCTTCCAGTTGATGAACTTATTGAGAAGGCTGATGGCTTTGCTGGTGTCTTCCCTGAGCACAAGTACGAAATTGTGAAGAGACTTCAGGATAGGAAGCACATTTGTGGCATGACAGGAGATGGTGTGAACGATGCTCCTGCCCTGAAAAGAGCAGACATTGGAATAGCTGTGGCCGATGCAACCGATGCAGCTCGAGGTGCATCTGACATTGTCCTGACGGAGCCTGGCCTGAGCGTGATTGTGAGTGCAGTGCTGACAAGTAGGGCCATATTCCAGAGGATGAAGAACTACACCATATATGCTGTTTCTATAACAATCCGAATAGTGCTTGGCTTCCTGTTGCTTGCTCTCATATGGAAGTTTGACTTCTCACCTTTCATGGTTCTAATCATTGCCATACTCAATGACGGCACCATCATGACCATTTCCAAGGACAGGGTGAAGCCATCTCCAGTGCCAGATTCCTGGAAGCTCAGGGAGATATTCGCCACTGGCGTTGTGCTTGGTGCCTACCTCGCTGTCATGACCGTTGTATTCTTCTGGGCCGCTCATGCATCTGACTTCTTCACGTCAGTTCTTAACCTCTTGTATACATGGCAGGACAAATTTGGCGTGAGATCTATTAGGGAAAACCACAATGAGCTCACAGCAGCAGTTTACCTTCAAGTGAGCATTGTGAGTCAGGCTCTCATCTTCGTCACACGCTCAAGGAGCTGGTCTTTTGTGGAACGCCCCGGCTTCTTTCTTATTATTGCCTTTTTCATAGCACAACTGATTGCCACCATCATAGCTGTGTACGCAAACTGGAGCTTTGCAAAAATGAAAGGAATTGGATGGGGTTGGGCTGGTGTCATTTGGCTCTACAGCATTGTTTTCTACATTCCCTTGGACATACTCAAGTTCATCATTCGATATGCATTGACCGGCAAGGCATGGAATAACATAACTGAGAACAGGATTGCTTTCACCTCGAAGAAGGACTATGGAAGGGGTGAGAGAGAGGCACAATGGGCTGCAGCTCAACGCACACTGCATGGCCTGAATCCTCCGGAGACCGAAGAAATCTTAAATGAAAAGAACAATTACAGGGAATTGTCTGAATTGGCTGAACAGGCCAGGAAACGTGCTGAAGTTGCAAGGCTGAGGGAACTTCACACACTCAAGGGACATGTTGAGTCTGTTGTCAAGCTCAAGGGACTCGACATTGAGACAATTCAGCAGCACTACACCGTTTGA 2847 0.4787 MGGLEEIKKETVDLERIPVDEVFRELNCSKEGLTNEEGQKRLQESKVLKFLGFMWNPLSWVMEAAAIMAIAMANGGGEPPDWQDFVGIMVLLIVNSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLDGDALKIDQSALTGESLPVTKNPGDEVFSGSTVKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIALGMIIEIVVMYPIQHRRYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKSLVEVFARDADKDTVILFGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDTDGNWHRVSKGAPEQIIELCHLREDVKKKALSIIDKFADRGLRSLAVARQEVPEKSKESAGGPWQFLGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPVPDSWKLREIFATGVVLGAYLAVMTVVFFWAAHASDFFTSVLNLLYTWQDKFGVRSIRENHNELTAAVYLQVSIVSQALIFVTRSRSWSFVERPGFFLIIAFFIAQLIATIIAVYANWSFAKMKGIGWGWAGVIWLYSIVFYIPLDILKFIIRYALTGKAWNNITENRIAFTSKKDYGRGEREAQWAAAQRTLHGLNPPETEEILNEKNNYRELSELAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIETIQQHYTV 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2553g00001 948 Pfam E1-E2 ATPase 118 295 - -
Mupr2553g00001 948 SFLD p-type atpase 298 627 IPR044492 -
Mupr2553g00001 948 SUPERFAMILY Calcium ATPase, transduction domain A 119 216 IPR008250 -
Mupr2553g00001 948 Gene3D - 328 475 IPR023299 GO:0000166
Mupr2553g00001 948 NCBIfam HAD-IC family P-type ATPase 88 337 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 NCBIfam HAD-IC family P-type ATPase 550 661 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 Pfam haloacid dehalogenase-like hydrolase 312 589 - -
Mupr2553g00001 948 Gene3D - 81 812 - -
Mupr2553g00001 948 SUPERFAMILY Calcium ATPase, transmembrane domain M 13 843 IPR023298 -
Mupr2553g00001 948 SUPERFAMILY HAD-like 312 622 IPR036412 -
Mupr2553g00001 948 ProSitePatterns E1-E2 ATPases phosphorylation site. 318 324 IPR018303 -
Mupr2553g00001 948 SMART Cation_ATPase_N_a_2 13 74 IPR004014 -
Mupr2553g00001 948 FunFam Plasma membrane ATPase 469 623 - -
Mupr2553g00001 948 Gene3D - 119 203 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 316 330 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 598 610 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 166 180 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 492 502 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 470 481 - -
Mupr2553g00001 948 PRINTS P-type cation-transporting ATPase superfamily signature 575 594 - -
Mupr2553g00001 948 FunFam ATPase 4 plasma membrane-type 561 812 - -
Mupr2553g00001 948 FunFam Plasma membrane ATPase 119 203 - -
Mupr2553g00001 948 CDD P-type_ATPase_H 32 838 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mupr2553g00001 948 NCBIfam plasma-membrane proton-efflux P-type ATPase 43 803 IPR006534 GO:0008553|GO:0016020|GO:0120029
Mupr2553g00001 948 PRINTS H+-transporting ATPase (proton pump) signature 432 450 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 PRINTS H+-transporting ATPase (proton pump) signature 606 631 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 PRINTS H+-transporting ATPase (proton pump) signature 575 591 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 PRINTS H+-transporting ATPase (proton pump) signature 547 563 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 PRINTS H+-transporting ATPase (proton pump) signature 757 778 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mupr2553g00001 948 PANTHER CALCIUM-TRANSPORTING ATPASE 15 880 - -
Mupr2553g00001 948 Gene3D - 897 948 - -
Mupr2553g00001 948 SFLD Haloacid Dehalogenase 298 627 - -
Mupr2553g00001 948 Coils Coil 892 919 - -
Mupr2553g00001 948 Gene3D - 313 612 IPR023214 -
Mupr2553g00001 948 FunFam Plasma membrane ATPase 328 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2553g00001 Mupr-Chr2553 13197 17080 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2553g00001 5 948 Primary Pumps ATPases AT3G42640 81.571 0.0 1583