Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2549g00004 ATGTATGCAATGGAGAATCCTTGGTACAGTGGTGGACAATGTCAAAGTAGCAGCCAGAAGCAGGTTGTTAAGTTGGGAAGTCAGAAAGAAAGATTTGTATTGGAAAAGAAAGGTATGAGCATGACAAGTTCATCTTCTGGGCAGCCGCAATTCATTGCCAGCAGCGGTAACCGGAGCTTGTCGAATGCGCCGCTGATTGAAAACTCAGATACTCATCAAATTGTTGTTCCTGATGTCAGTTTGCTTTGCCATTTAATCTTTTCAATTTTTACTGCTTATCTTTTGCATGATGCTCTTAGAAAAAGCTGGAAAAACTTATTTGCATACGTGGGGCCTGGATTTCTTGTTTCCATTGCATATATCGATCCAGGAAACTTTGAGACAGATCTTCAATCAGGGGCCCAATATAAATATGAGTTACTTTGGATCATATTGGTGGCGTCATGTGCTGCTCTTCTAATTCAATCAATGGCAGCTAATCTTGGGGTTGTCACTGGGAAGCACCTAGCAGAGCATTGTAGAACTGAATATTCTAGGGTGCCCAACTTTATCCTTTGGGTTATTGCTGAAATTGCCATAGTGGCATGTGACATTCCTGAAGTAATTGGGACAGCCTTTGCATTGAACATGCTTTTCAACATACCTGTTTGGATTGGTGTTCTTCTGACAGGACTCAGCACATTGACCCTCTTAGCATTACAGCAATATGGGGTTAGGAAACTGGAATTCTTCATTGCATTTCTAGTATTTACAATTGCTGGTTGCTTTTTGGCTGAGCTTGGATATGCAAAGCCGGTGGCTAAAGAAGTTGTGACGGGTCTTTTTGTTCCAAAAATTGAGGGGCATGGTGCCACTGGTCTTGCAATTTCACTCCTTGGGGCAATGGTTATGCCCCACAATCTCTTCCTCCACTCAGCGCTGGTGCTTTCCAGGAAAATACCGCGATCAGTTCGTGGAATCCGAGAGGCTTGCAGATTTTACATGATAGAAAGTGCCTTTGCTCTTACCGTGGCCTTTCTCATAAATATTTCTGTTATTTCTGTAAGTGGTGCAGTTTGCAATTCTTCAAACCTAAGTGCTGAAGATCAGAATAGCTGCGAGGATTTGGATTTGAACAAGGCCTCCTTTTTATTAAGAAATGTGTTGGGCAAATGGAGTTCAAAACTATTTGCAGTTGCTTTACTTGCATCAGGTCAAAGTTCTACTATAACAGGAACGTATGCAGGGCAATATGTCATGCAGGGATTTCTTGATTTGCGACTCAAGTCATGGATTCGGAATATGTTAACTCGTTGCATAGCCATTGTTCCTAGTTTGATTGTTGCACTTATTGGTGGCTCTGCTGGAGCTGGGAAGCTCATCATAATTGCTTCGATGATTTTATCTTTCGAGCTTCCTTTTGCTTTGATTCCACTCCTTAAGTTCACTAGCAGCAAAACCAAGATGGGCGAACATGTCAACTCAGTCACGATTTCGGTTGTTACTTGGATCATTAGTTCCCTCATCATGGGCATAAATATATACTATTTATTGACTAGCTTTGTCAAGTTGCTTCTTCATGCCCACTTAAAAATTGTTGCTAAGGTGTTTCTCGGGATATTGGGATTTTCGGGTGTGGCAATGTACATGGGAGGCATTGCATATCTAGTGTTTCGCAAAAATAAAAAGGCTATACACCTTTTGGCATTTAGCACACCAGAAGATCAGCAAGTGGCAAATGAACAAGGCGATATATCGATGTTTAGTCTCCCAAGAGAAGACATAGTGAGCATGCAATTGCCTCAAAAAAGTAGTCGAGCAGAAATTGATTGA 1812 0.4156 MYAMENPWYSGGQCQSSSQKQVVKLGSQKERFVLEKKGMSMTSSSSGQPQFIASSGNRSLSNAPLIENSDTHQIVVPDVSLLCHLIFSIFTAYLLHDALRKSWKNLFAYVGPGFLVSIAYIDPGNFETDLQSGAQYKYELLWIILVASCAALLIQSMAANLGVVTGKHLAEHCRTEYSRVPNFILWVIAEIAIVACDIPEVIGTAFALNMLFNIPVWIGVLLTGLSTLTLLALQQYGVRKLEFFIAFLVFTIAGCFLAELGYAKPVAKEVVTGLFVPKIEGHGATGLAISLLGAMVMPHNLFLHSALVLSRKIPRSVRGIREACRFYMIESAFALTVAFLINISVISVSGAVCNSSNLSAEDQNSCEDLDLNKASFLLRNVLGKWSSKLFAVALLASGQSSTITGTYAGQYVMQGFLDLRLKSWIRNMLTRCIAIVPSLIVALIGGSAGAGKLIIIASMILSFELPFALIPLLKFTSSKTKMGEHVNSVTISVVTWIISSLIMGINIYYLLTSFVKLLLHAHLKIVAKVFLGILGFSGVAMYMGGIAYLVFRKNKKAIHLLAFSTPEDQQVANEQGDISMFSLPREDIVSMQLPQKSSRAEID 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2549g00004 603 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 105 482 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 NCBIfam Nramp family divalent metal transporter 111 479 - -
Mupr2549g00004 603 Pfam Natural resistance-associated macrophage protein 126 488 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 Hamap Divalent metal cation transporter MntH [mntH]. 90 514 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 51 558 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 398 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 213 232 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 238 259 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 426 443 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 288 311 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 458 477 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mupr2549g00004 603 PRINTS Natural resistance-associated macrophage protein signature 185 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2549g00004 Mupr-Chr2549 43833 49608 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2549g00004 53 596 Inorganic Solute Cotransporters AT1G15960 75.824 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2549g00004 K21398 - gmx:100815628 953.355