Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2548g00003 ATGGGTAACAACAGGTTCAAGTTGTCAGATATGATACCAAATGCTTGGTTTTACAAACTAAAAGATATGAGCAGATCAAGGAAGAGAAATGGTTCTCATGTTATGAAGAGTAAAGTGTCCTCACCAACAACATCACAGAGGTCGCTGCCAAGATATTCACACTATTTCTCCACTGAGCCAATGAGAGCTGGTAAGCTATACAACACTCCCATTCACACCAAAGACTTGGACATGCCATTCACTGATTCTCCTAGAAGGTCATCCAAGAGAAGGGGTAGGAGAAAAACCATTTACAAGCCTTCTCCTACTGTTGTCCCCTCCTCTTTCATACCAAATTCCAGCTATGATTCCACAAATCATTGGATCAAGCCGTGTCAAGTTCAGTCACCAGATTATGATGTGTCCTCAGTTGAAAGCTCTTCTGAGTCTGATCTCCATGAGTATGCTTATTCTGAGTCTGAATGTGACAGCTTTTCTGTTCCTGACTTGCTCAATGGAATGGCCTCTAATTGCAGCTGCAGAGTTAGCTCTTCCACTAATGACATCATCATTGACATGAACAATGAGTCCTTCCTTGGTGAAAAGAAAGATGGGTTTGATGCAATTTCACAGCTAGGTCTTGCTCCAATATTGACCAAGCCGGTGAAGTTTGATGATAAGGTCATTGAAGCCACTGAGCTGACAAGTTCAACTGAATTGGATGAACTGGAGGATGATCAGTCTTTCTCAATTGAGATTAACAAAGAGGAAAGCAATAGGACTCAAAGGAGGAGGAAAAGCAGTCATAGAAAGCCCTTTGCTAATTCTGCAGGCATAAGGCTTAGGATCAACTCTCCAAAACTTGCAAGCAGAAAGATTCAAGCATGTGCAAGGAGGAGTGTCTCATCCACTGCAAGCAAAGCTTCAAGGAGTACAAGCTTCCCAGATGGCTTTGCTGTTGTTAAGTCCTCATTTGATCCACAGAGTGACTTCAGGGAATCAATGGTGGAGATGATTGTGGAGAATAATATCCGGGCGTCCAAGGATTTGGAGGACTTGCTTGCCTGCTATCTTTCCCTCAATTCAACTGAATACCATGATCTCATTGTTAAAGCATTTGAGCAAATTTGGTTTGACATGGCTCAACTCAGAATAACGGTGGATATTCCCTATAAGAAACATGTTAGCCACATTGTCAATCAGAACGTTGGATACATCAAATGCACTAGATAA 1212 0.42 MGNNRFKLSDMIPNAWFYKLKDMSRSRKRNGSHVMKSKVSSPTTSQRSLPRYSHYFSTEPMRAGKLYNTPIHTKDLDMPFTDSPRRSSKRRGRRKTIYKPSPTVVPSSFIPNSSYDSTNHWIKPCQVQSPDYDVSSVESSSESDLHEYAYSESECDSFSVPDLLNGMASNCSCRVSSSTNDIIIDMNNESFLGEKKDGFDAISQLGLAPILTKPVKFDDKVIEATELTSSTELDELEDDQSFSIEINKEESNRTQRRRKSSHRKPFANSAGIRLRINSPKLASRKIQACARRSVSSTASKASRSTSFPDGFAVVKSSFDPQSDFRESMVEMIVENNIRASKDLEDLLACYLSLNSTEYHDLIVKAFEQIWFDMAQLRITVDIPYKKHVSHIVNQNVGYIKCTR 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2548g00003 403 MobiDBLite consensus disorder prediction 27 53 - -
Mupr2548g00003 403 NCBIfam uncharacterized plant-specific domain TIGR01568 311 373 IPR006458 -
Mupr2548g00003 403 Pfam DNA-binding domain 1 45 IPR025830 GO:0003677
Mupr2548g00003 403 MobiDBLite consensus disorder prediction 241 256 - -
Mupr2548g00003 403 MobiDBLite consensus disorder prediction 35 53 - -
Mupr2548g00003 403 ProSiteProfiles OVATE domain profile. 313 372 IPR006458 -
Mupr2548g00003 403 MobiDBLite consensus disorder prediction 72 103 - -
Mupr2548g00003 403 Pfam Transcriptional repressor, ovate 317 373 IPR006458 -
Mupr2548g00003 403 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 158 373 IPR038933 GO:0045892
Mupr2548g00003 403 MobiDBLite consensus disorder prediction 238 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2548g00003 Mupr-Chr2548 19044 21142 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mupr2548g00003 Ovate 6.4e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2548g00003 - - gmx:100780926 653.669