Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2548g00002 ATGCTGACAGAGCACTTTACAAGTTGTCTTTCTCCACTTAGTGGCCCCACCCCTAGTACACATGACAAAGCCACAATGGTGCCAATACCTGCTTATTCTCCCATCCAATCACACCTTGCACCACTTTCTCTCCCTCTGCAACTTTCGTTGTCAAATAGAACAAGAAAGAAGAAAAATCAAATGGTTGCTAAGGACTATAACCACTTAACATGTACGGTTGTTAACATGGGCAAAATGATTCAGAGCATTGACTATTCTAGACTTTTTTGGCTATTTTTTGGGATTTTCTCTCACAGAGAGAACAAGGAAGATGGCAAGGGAGAATATTGTTATGTGGAAACCGATCCAACTGGTCGCTATGGCAGGTTTGGAGATGTTCTTGGGAAAGGGGCAATGAAGACAGTGTACAAAGCAATTGATGAGGTGCTTGGAATTGAGGTAGCATGGAACCAGGTTAGACTCAACGAGGTGCTTCGCTCGCCAGAGGATTTGCAGCGGCTTTACTCAGAGGTTCATCTCCTCAGTACCCTCAAGCACCAGTCCATCATAAGATTCTACACTTCTTGGATTGATGTTGATAACAAGGCCTTCAACTTTATCACAGAAATGTTCACATCAGGGTCACTGAGAGAATACAGGAAGAAATATAAGCGGGTTAGCATACAAGCTATAAAGAATTGGGCTCACCAAATCTTGCAAGGTCTAGTTTATCTACATGGCCATGATCCACCTGTGATCCATAGGGACCTCAAATGTGATAACATATTTGTCAATGGTCATCTTGGACAAGTAAAAATTGGTGACCTGGGATTGGCTGCAATTCTCCGCGGTTCCCAATCAGCACACAGTGTCATAGGCACCCCTGAGTTCATGGCACCAGAATTGTATGAGGAAGAATACAATGAACTTGCTGATGTGTACTCATTTGGCATGTGTGTGTTGGAAATGCTTACATCTGAATATCCATATAGTGAATGTTCCAATCCAGCACAAATCTACAAGAAAGTAACATCGGGAAAACTACCAATGGCTTTTTTCCGGATTGAAGACATGGAAGCACAAAAGTTCATTGGAAAATGCTTAGTAGCTGCAGCAAAGAGACCGTCCGCGAAAGAATTGTTGCTTGATCCTTTCCTTGTGTCTGATGATTCATCATCAACACTGAAGTTTGCAATTCAGAAGCCATTCTTGAATGTCAGTGAGATGGAGAAACTTCAATTAAGTGATGATCTTCCTAGGACTGGAATGAAAGTGATCGGGAAGCTGAATCCTGAAGATGATACTATCTTTCTCAAAGTGCAAATTTCTGATAAGGATGGTTGTGTTAGGAATGTGTTCTTTCCCTTTGATATTTTCAATGACACCCCCATTGATGTTGCAACTGAGATGGTGAAAGAGTTGGAGATTGCTGATTGGGAGCCTTATGAGATTGCAAACATGATCGATAGAGAGATATCTGCTCTGCTACCCCACAGAAGGCAAAGTAACTGTTCAGATGCCTTCCACACCTTCAATTATCTAGATGATGATGGTGATGACGATGGACCTCATCATCATTTCCGCTCATTCTCTTCTAGTTCATCATTCCAAGAACCAATGGCAGATTTAATCAGTAAAGCTGAGGAAATATCAAATGGATATTATTGGTTCCATGATGATTTGCATGATGATACCAGTTCACGATGCTCTTCACAAGGGACATATTCCAACTTGAATTACTATTCCGTGGATGATCAAGAGTACAACGTTAACGTGCCTCCTTTGAGAAAAGATAATAAACTTCCCATCATAAAGAGTCACAAGGGCAAAAAAGTTTCATCTGGTGAAGACTTGAGCAATTTCAACCAGTTCAAAATCATGGCAGGATCACAGGCTCCTTTTACTAGTAAAAATAAGATGATGATAAACAATCATAGATTAACAAGGAACAGATCGTTGATTGATATAAGGAGCCAACTACTACACCGATCACTGGTTGAAGAGGTAAACAAAAGACGGTTATTCAAGACAGTTGGTGCTGTGGAAAATATTGGATTTCAAGCCCCTTGTGATGTTACCCCGAAAAGGTCACGTCCTGCATGTGTTGCTCCAAATCAGAACTCTCCCAGGAGTGGCAAGGGAGAAAAAATTAAGCGATAA 2139 0.4123 MLTEHFTSCLSPLSGPTPSTHDKATMVPIPAYSPIQSHLAPLSLPLQLSLSNRTRKKKNQMVAKDYNHLTCTVVNMGKMIQSIDYSRLFWLFFGIFSHRENKEDGKGEYCYVETDPTGRYGRFGDVLGKGAMKTVYKAIDEVLGIEVAWNQVRLNEVLRSPEDLQRLYSEVHLLSTLKHQSIIRFYTSWIDVDNKAFNFITEMFTSGSLREYRKKYKRVSIQAIKNWAHQILQGLVYLHGHDPPVIHRDLKCDNIFVNGHLGQVKIGDLGLAAILRGSQSAHSVIGTPEFMAPELYEEEYNELADVYSFGMCVLEMLTSEYPYSECSNPAQIYKKVTSGKLPMAFFRIEDMEAQKFIGKCLVAAAKRPSAKELLLDPFLVSDDSSSTLKFAIQKPFLNVSEMEKLQLSDDLPRTGMKVIGKLNPEDDTIFLKVQISDKDGCVRNVFFPFDIFNDTPIDVATEMVKELEIADWEPYEIANMIDREISALLPHRRQSNCSDAFHTFNYLDDDGDDDGPHHHFRSFSSSSSFQEPMADLISKAEEISNGYYWFHDDLHDDTSSRCSSQGTYSNLNYYSVDDQEYNVNVPPLRKDNKLPIIKSHKGKKVSSGEDLSNFNQFKIMAGSQAPFTSKNKMMINNHRLTRNRSLIDIRSQLLHRSLVEEVNKRRLFKTVGAVENIGFQAPCDVTPKRSRPACVAPNQNSPRSGKGEKIKR 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2548g00002 712 MobiDBLite consensus disorder prediction 1 20 - -
Mupr2548g00002 712 ProSiteProfiles Protein kinase domain profile. 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2548g00002 712 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Mupr2548g00002 712 Pfam Protein kinase domain 125 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2548g00002 712 SUPERFAMILY Protein kinase-like (PK-like) 122 407 IPR011009 -
Mupr2548g00002 712 Gene3D Transferase(Phosphotransferase) domain 1 204 386 - -
Mupr2548g00002 712 Gene3D Phosphorylase Kinase; domain 1 106 202 - -
Mupr2548g00002 712 SMART serkin_6 121 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2548g00002 712 FunFam Probable serine/threonine-protein kinase WNK1 106 202 - -
Mupr2548g00002 712 FunFam probable serine/threonine-protein kinase WNK9 204 384 - -
Mupr2548g00002 712 CDD STKc_WNK 119 379 - -
Mupr2548g00002 712 MobiDBLite consensus disorder prediction 688 712 - -
Mupr2548g00002 712 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 108 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2548g00002 Mupr-Chr2548 11440 15643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2548g00002 111 688 MAP Kinase Kinase Kinase AT5G58350 60.720 0.0 657
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Mupr2548g00002 Pkinase 6.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2548g00002 K08867 - gmx:100272203 1047.73