Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2545g00006 ATGTCTTACAGACTAAACTTAAGGGGCTGTGTACCGGTCGGCCTAGATGGGATACCGGGTGACAAGGAATCGAGCGGTCCTCCTATTTCTAACAATTTCCACCGTTGTTTTGCAGCTAGAGATCTTATTGATAAACAGCACGTCGAAGCAATAATAGGACCCCAAACATGGGAAGAGACAACTTTAGTGGCTCAGATTTATAGCCAAAATATGACCCCAGTTCTTTCTCTAGCTGATGCAACTCCAAAGTGGTCAACTTTGAAGTGGCCATTCCTTGTGCAATCTTCACCTAATCAGTTTAAGCAGATGAAAGCAGTAGCAGCTATTCTTCATTCCTTTGAATGGCTCAATGTAAACATAATATATGAAGATGGGGATTCTTCATCCACAAGAATGTTATCTTATCTCTATAGTGCTCTTAGCAAAAATGGCGTACAAATAAGCAATCTTTTGGCCATGCCTCCTTTAATTTCCTCTTCATTGTCCCATGAACTTGAGAAGCTTAGAGATGGCCAATGCAGAGTCTTTGTTGTTAGTTTGTCCCTTCCTTTGGCCATAAACCTGTTTGAAACTGCTCACAAATTGAACATGATGGAGAAAGGCTATGTGTGGATCATTACTGACCCTTTTACAAGTCTTGTCCATTCCTTGAAAGCATCTACTATATCCTCCATGCAAGGGATAATTGGAGTAAAGAGCTACTTCCCAGAAAAAGGGCTTCAATATGAGGATTTCTACCTTAAATTTCGCCAAAAGTTTAGCTCAGAGAACCCTCATGAGTTTAACAATGAGCCTGGGATATTTGCAGCACGTGCTTATGATGCTGCATGGACTCTTGCTCTAGCCATGAGCCACAAAAACAGTAAAGGTGACCAAATTTTGCTAGATAAGATTCTGATTAGTAATTTTACTGGCTTAAGTGGGAAAATTCAGTTCACTGACCAGAAGTTAGATCCTTCACATACTTTTCAGATCATCAATGTGATAGGGAAAGGTTACAAGGAAATTGGATTCTGGTCAGATGAACTAGGCTTCTCAAATAATATTGGCCAAAATGCTACTTTCAATTCTTCAATGAAGGAACTAGGACAAGTTTTATGGCCAGGAAGACCTTGGGGAATTCCAAGCGGATGGAGCTTGGCAACAAGGGATGAACCACTAAGAATTGGTGTCCCCGTTTTGGCCACATTGAAACAGTTCATAAATGTAATTCAAGACCAAACTGACAACACTACCATCTTCCAGGGATTCACTATTGATCTTTTTAGAGCAACTATGGACTTGTTGCCCTATCATTTGCCATACAAATTCTATCCTTTCAATGACACATATGACAATTTGGTGAAGCAAGTTTATTTAAAGAATTTCGATGCAGTAATTGATGTGACAATAATTTCATATCGATATCAGTACGCAGAATTCACTCAGCCATACACTGATCCGGGAGTGGTGATGGTGGTCCCCCTTAAATCAAAAGTAGAACATAGAGCTTGGTTGTTTATGAAACCTTTTACAAAGACTATGTGGGTTCTGATATTGGCCATGATTATCTACAATGGCTTTATTCTATGGATGTTGGAAAGACGCCACAGTCCTGAAATTAGAGGTTCCGTGCTGAATCAAACTGGGACCATGGCTTGGTTGGCATTGACCCCTCTAATCAAGTTAGATGGGAATAAGTTATACAGCAATTTATCAAAGATTGTTATGGTGGCCTGGTTGTTTGTGGCACTTATCATAACACAGACTTACACAGCTAACCTTGCCAGCATGCTAACTTCTGAAAGGCTTGAACCCACCATAGATGATATTGATCAGGTAAGGAATAGCAACGTCATGGTTGGATACGGTGCAGGATCCTTTTTGAAAAATTATGTGACTGAAGTGTTACAGTTCCACCCTGCAAACATGAGGCAATTTGGTGCACTTGAAGAGTATGCTGAAGCTCTCAGAAGGAAAGAAATAGGAGCTGCCTTTCTTGAAGTTCCTGCTGCCAAAATTTTCCTTGCTAAGTACTGTAAAGAGTTTACTCAAGCCGGACCTTTATATAAAATTGGAGGATTTGGATTTGCATTTCCAAAGGGGTCTCCATTTCTTCCAAATGTAAACAAAGCACTTTTAGATTTATTTGAAACTGGCAAGGTACGTGACTTAGAGAACAGAATGCTTGCATCGGAGCAATGTGAAGACACAGAACAAGATGGAGAAACTGCAAGTCTTAGCCCCAACAGCTTCTGGTCCCTCTTCATATTGACAACAGGCACATCAACAATTGCTCTCTTGGTTTACGTTCTTCGCATGAACTATGCAAACCGTGAAGAGAAAATAATCTGGAGACTGACCATGATGATCATTCAACAATGTGGACATGCAAAGAGACGAATGTCAAGAAGAGTTAGCGATGTTGCAGAAAGTCCTATGACCTCTCCAACCACACATGCTACGCCAACTCAA 2454 0.4055 MSYRLNLRGCVPVGLDGIPGDKESSGPPISNNFHRCFAARDLIDKQHVEAIIGPQTWEETTLVAQIYSQNMTPVLSLADATPKWSTLKWPFLVQSSPNQFKQMKAVAAILHSFEWLNVNIIYEDGDSSSTRMLSYLYSALSKNGVQISNLLAMPPLISSSLSHELEKLRDGQCRVFVVSLSLPLAINLFETAHKLNMMEKGYVWIITDPFTSLVHSLKASTISSMQGIIGVKSYFPEKGLQYEDFYLKFRQKFSSENPHEFNNEPGIFAARAYDAAWTLALAMSHKNSKGDQILLDKILISNFTGLSGKIQFTDQKLDPSHTFQIINVIGKGYKEIGFWSDELGFSNNIGQNATFNSSMKELGQVLWPGRPWGIPSGWSLATRDEPLRIGVPVLATLKQFINVIQDQTDNTTIFQGFTIDLFRATMDLLPYHLPYKFYPFNDTYDNLVKQVYLKNFDAVIDVTIISYRYQYAEFTQPYTDPGVVMVVPLKSKVEHRAWLFMKPFTKTMWVLILAMIIYNGFILWMLERRHSPEIRGSVLNQTGTMAWLALTPLIKLDGNKLYSNLSKIVMVAWLFVALIITQTYTANLASMLTSERLEPTIDDIDQVRNSNVMVGYGAGSFLKNYVTEVLQFHPANMRQFGALEEYAEALRRKEIGAAFLEVPAAKIFLAKYCKEFTQAGPLYKIGGFGFAFPKGSPFLPNVNKALLDLFETGKVRDLENRMLASEQCEDTEQDGETASLSPNSFWSLFILTTGTSTIALLVYVLRMNYANREEKIIWRLTMMIIQQCGHAKRRMSRRVSDVAESPMTSPTTHATPTQ 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2545g00006 818 FunFam Glutamate receptor 497 635 - -
Mupr2545g00006 818 CDD GluR_Plant 386 723 - -
Mupr2545g00006 818 Gene3D - 656 685 - -
Mupr2545g00006 818 Gene3D - 98 341 - -
Mupr2545g00006 818 Gene3D - 496 631 - -
Mupr2545g00006 818 MobiDBLite consensus disorder prediction 797 818 - -
Mupr2545g00006 818 Gene3D - 686 721 - -
Mupr2545g00006 818 SUPERFAMILY Periplasmic binding protein-like II 364 721 - -
Mupr2545g00006 818 MobiDBLite consensus disorder prediction 802 818 - -
Mupr2545g00006 818 PIRSF IGluLR_plant 29 815 IPR017103 -
Mupr2545g00006 818 CDD PBP1_GABAb_receptor_plant 38 349 IPR044440 -
Mupr2545g00006 818 SMART GluR_14 388 725 IPR001320 GO:0015276|GO:0016020
Mupr2545g00006 818 Pfam Bacterial extracellular solute-binding proteins, family 3 410 721 IPR001638 -
Mupr2545g00006 818 Pfam Receptor family ligand binding region 39 329 IPR001828 -
Mupr2545g00006 818 Gene3D - 39 321 - -
Mupr2545g00006 818 Pfam Ligand-gated ion channel 722 754 IPR001320 GO:0015276|GO:0016020
Mupr2545g00006 818 FunFam Glutamate receptor 382 496 - -
Mupr2545g00006 818 Gene3D - 386 495 - -
Mupr2545g00006 818 FunFam Glutamate receptor 102 263 - -
Mupr2545g00006 818 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 787 IPR015683 -
Mupr2545g00006 818 SUPERFAMILY Periplasmic binding protein-like I 37 378 IPR028082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2545g00006 Mupr-Chr2545 25134 28668 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2545g00006 38 817 Ion Channels AT2G29110 32.681 5.55e-138 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2545g00006 - - gmx:100799573 1317.75