Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2542g00001 ATGCATGTGGATATCAAATGTGAAAATAAATACAGTGGCACTACCTTTCAGGGAGCATATTCATATCAGGCCTTGACCTTGTCTTTGGAGCCAACTGAGACTTCAAGAATTTGTGCTGAGGGTGGCCAATTGGTTCATATGAGGGAAGGTGGAGGGGGATTGTGGGTCAATCTTGATTTCCGTGAGTGGCATTGGAAGCTCCTTCAAAGTGTCATTGATTTCAACTATGTGCAGAGCAGATGCAATGGATTCCCACACCAGATGTCAAGTACTCTTGCAGCAATATTTGGAGGAGCTGCAGGAGCCGTGGCATTGGTAGGGATTGGTATAATACTTATATGGTTTTGTCTCTCTCGTCAGAGGAATGTTTCTAGGACTTCAGAGACAGGGTCCTCTGATCGTTCCCAAGTGGGAAGACATGGCGCAATTGAGTTGCCTATACGAGATACTAGGCGTTTTGAGATGGAAGAACTATCTCATGCCACAAAAAATTTCAGTGACAAGAATTTGATTGGAGAAGGGAAATTTGGGGAGGTTTACAAGGGTTTACTTCAAGAAGGGATGCTTGTAGCCATCAAAAAACGCCGCGGACTCGCTAGTCAGGAATTTATTGATGAGGTGCGGTATCTCTCGTCTATTCACCATCGGAATCTTGTCAGTCTTTTAGGCTACTGCCAGGAGAACAATCTTCAGTTTCTCATATATGAATATGTGCCTAATGGAAGCGTCTCCAGTCACTTGTATGGCGCCGGCCAACAACCACGACAGAAGCTAGAATTCAAGCATAGACTTCCAATAGCTCGAGGTGCAGCTAAAGGTTTGGCTCATCTCCACTCTCTGAGTCCCCGTTTGGTGCATAAGGATTTCAAAACCGCTAATGTTCTTGTGGATGAAAACTTCATTGCTAAGGTGGCAGATGCTGGACTTCGCAATTTTTTGGGGAGAGTTGACATTGCAGGCTCCTCTTCTCAAGTGGCAACAGATGAAATATTCCTTGCACCAGAGGTGAGAGAGTTCAAACGATTTTCTGAAAAGAGCGATGTATACAGCTTTGGGGTGTTTATGCTGGAATTGTTAAGTGGAAAAGAAGCAATAGAATCACCATTTCCAGACTCTAACCAAAATCTGGTTGAATGGGTGCTAAGTAATCAAGACCGTGGCATGATGTCTTACATCATTGATAGGAGATTGGAGAGTAGTTTTACAGCTGAAGGCATGGAAGACTACATCATGCTCATAATTAGATGCTTAGACCCTTCAAGTGAGAGGCGACCTGCCATGAGCTATGTGGAAATGGAACTTGATCGGATCCTAGAGAAGGAAATGAACTTGACAACAATCATGGGAGAAGGAACCCCAACTGTGACTCTTGGAAGCCAGTTATTCAAATCAACAAAATAA 1401 0.4383 MHVDIKCENKYSGTTFQGAYSYQALTLSLEPTETSRICAEGGQLVHMREGGGGLWVNLDFREWHWKLLQSVIDFNYVQSRCNGFPHQMSSTLAAIFGGAAGAVALVGIGIILIWFCLSRQRNVSRTSETGSSDRSQVGRHGAIELPIRDTRRFEMEELSHATKNFSDKNLIGEGKFGEVYKGLLQEGMLVAIKKRRGLASQEFIDEVRYLSSIHHRNLVSLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQPRQKLEFKHRLPIARGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIAKVADAGLRNFLGRVDIAGSSSQVATDEIFLAPEVREFKRFSEKSDVYSFGVFMLELLSGKEAIESPFPDSNQNLVEWVLSNQDRGMMSYIIDRRLESSFTAEGMEDYIMLIIRCLDPSSERRPAMSYVEMELDRILEKEMNLTTIMGEGTPTVTLGSQLFKSTK 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2542g00001 466 ProSitePatterns Serine/Threonine protein kinases active-site signature. 284 296 IPR008271 GO:0004672|GO:0006468
Mupr2542g00001 466 FunFam Protein kinase superfamily protein 130 237 - -
Mupr2542g00001 466 ProSiteProfiles Protein kinase domain profile. 165 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2542g00001 466 SMART serkin_6 165 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2542g00001 466 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 101 443 IPR047117 -
Mupr2542g00001 466 Gene3D Phosphorylase Kinase; domain 1 126 237 - -
Mupr2542g00001 466 ProSitePatterns Protein kinases ATP-binding region signature. 171 194 IPR017441 GO:0005524
Mupr2542g00001 466 SUPERFAMILY Protein kinase-like (PK-like) 150 432 IPR011009 -
Mupr2542g00001 466 Pfam Protein tyrosine and serine/threonine kinase 169 433 IPR001245 GO:0004672|GO:0006468
Mupr2542g00001 466 FunFam Protein kinase superfamily protein 238 451 - -
Mupr2542g00001 466 Gene3D Transferase(Phosphotransferase) domain 1 238 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2542g00001 Mupr-Chr2542 2817 7203 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2542g00001 151 439 Receptor kinase-like Gene Family AT1G30570 40.678 4.71e-63 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Mupr2542g00001 PK_Tyr_Ser-Thr 3.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2542g00001 - - gmx:100305436 691.419