Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2541g00003 ATGAATAATTTTTCTCATGTTCCCCCCGGTTTTAGGTTCCACCCCACTGATGAAGAACTTGTTGATTACTACCTAAGGAAGAAAGTTACCTCAAGAAGGGTTGACCTCGATGTCATAAAAGATGTTGACCTCTATAAAATTGAGCCATGGGATCTTCAAGAGCTTTGCAGAATAGGAACAGAAGAAGAAAACGAATGGTACTTCTTTAGCCATAAAGATAAGAAGTATCCAACTGGAACTCGCACAAATAGAGCAACAGCAGCAGGGTTCTGGAAAGCAACTGGAAGAGACAAAGCAATCTACTCTAAGCATGATTTGATAGGGATGAGGAAAACCTTAGTCTTTTATAAAGGTCGAGCTCCTAATGGACAAAAATCAGATTGGATCATGCACGAGTATCGACTTGAAACAGATGAAAATGGCACACCACAGGCAAGTTTCAAAAAAAAAAAATGTTATGCTTTAAAGCAGGAAGAAGGATGGGTTGTCTGTAGAGTATTCAAAAAGAGACTACCAACCATGCGCAAACTGAGTGAGCATGATTCTCCCTGTTGGTATGATGACCAAGTCTCTTTCATGCAAGACATGGACTCACCAAAGCAAAGCTCTCAACCTAATTTGCCCTACCAAATCCAATATCCTTGCAAGAAAGAGATGGATTTGCCATACAATTTACCTTTCCAGCTTCCAATAGAGAACCAAAAACTGCTTCAATCTGCCTCCAACTCAATGGCACCATATTGCATAGAAGAAAGCCATGCCATGCAGGCAGCATCACTCATGCAACAACAAGTTCAACACTCTGGTCAACAAAATTTTCAGGCAGCGTTTGGAAACAATAATGCCAATGAACAAGTGGCTGATTGGAGAGCTCTTGACAAGTATGTTGCTTCACAACTTAGTCAAGAAGATGCATCCAAAGACAATAGTTACTCAAACGCAGGCAACATTTTTCAAATGAAGAACAATAGCAATATTGAACAGTTTAGAGATTTGGACAAGGAAGAAATGATGCCTGAAAATGCTTCAACATCAAACTCAAGCTGTCCAATTGACATTTTGTTAGTCTCGCATCAAGGATACGCTAAGACAAAAGATTATGGAACCTTAATTAATCCCTAG 1122 0.3966 MNNFSHVPPGFRFHPTDEELVDYYLRKKVTSRRVDLDVIKDVDLYKIEPWDLQELCRIGTEEENEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSKHDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETDENGTPQASFKKKKCYALKQEEGWVVCRVFKKRLPTMRKLSEHDSPCWYDDQVSFMQDMDSPKQSSQPNLPYQIQYPCKKEMDLPYNLPFQLPIENQKLLQSASNSMAPYCIEESHAMQAASLMQQQVQHSGQQNFQAAFGNNNANEQVADWRALDKYVASQLSQEDASKDNSYSNAGNIFQMKNNSNIEQFRDLDKEEMMPENASTSNSSCPIDILLVSHQGYAKTKDYGTLINP 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2541g00003 373 ProSiteProfiles NAC domain profile. 7 169 IPR003441 GO:0003677|GO:0006355
Mupr2541g00003 373 Pfam No apical meristem (NAM) protein 8 135 IPR003441 GO:0003677|GO:0006355
Mupr2541g00003 373 SUPERFAMILY NAC domain 4 169 IPR036093 GO:0003677|GO:0006355
Mupr2541g00003 373 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 298 - -
Mupr2541g00003 373 FunFam NAC domain-containing protein 16 173 - -
Mupr2541g00003 373 Gene3D NAC domain 16 171 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2541g00003 Mupr-Chr2541 42973 45874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2541g00003 1 353 NAC Transcription Factor Family AT1G12260 55.890 1.94e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mupr2541g00003 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2541g00003 - - gmx:100775867 588.571