Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2540g00008 ATGTGCTTGCTTGTTGGGCAATCCAAAAGGACCCAGAAAACAAAAGAATGGGCCAAAAGAGGCTTAGGCCCATTAGTGTCTCAGTTTCCCGCCACTTATATGTTGATCTTCCCGCCATCTCACTCTCACACATCAATCACTTGCTCTTTGGGTTCCTTCGTTCCCATTTTGCAAATACAATTCTCTGATCCTGTTCATAATTTCAATGATCCCACAACAAGAACCCGATTTCAATCCCAATCATCTCAAACTATATTACGATGGGTGTCTTATGGGAACGATGGGAAGCACCCTGGTTGTGATAAGTCCTACTTTGGGCGAAGAGAATTTTCCTTCACTCTAGAGAATGATATATATCTGCGCTTCCAATCTTTCAACAATGCCCTTGAGCTCGAAAACTCCGTCAAAGAAAAGTCCCCTGTTAAGATAGATATTGGACCTGTCTACACTGTTGATCCTGCAAAAAGGAATGCCTATGCACAGAGTGAAAATAATGTCTTTGCCCCAGTTGAGAGAGAGTTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGTTCGGGTGCTGACGTTTGTTTGGTTTGCTGGCCGCTGATGACAACAGCTATCAAAGTGATTGATACTGCCTTAAGAGATGACTTCGGTTTCAAACACATTCTCTGGGTCTATAGTGGACGCAGAGGTGTTCATTGTTGGGTCTGTGATGGGAAGGCAAGAAGGATGACTAATGAGCAAAGAGCTGCTGTTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAATAGTCACAAAAAGGTTTCTTTGACGGGTGCCTCTCTTCATCCTTTCTTGGCGACATCATACACTAATGTTCTCAAGGACTATTTTGAGAAAAAACTGCTTACAGGTCAAAATTTACTTGCTACTGAGGAGAGATATGAGAAGATCCTAAACATGATTCCTGATGAATGTACTTTTTTTCCTGTTCTCCCTTCATTTGAACCTTGTTATTTCATTTCTGCTATTATCTTATGCAAAGGGGGAAGATGGCAAGATAGTAGGCGGTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGATGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCACAAGGGCTGCGCCGGTGCGTTGAAGAGATTGTGTTCTGCTTTACTTATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTCTGTGTACATCCTAAAACAGGACGTGTTTGTGTCCCTATTGATCCAAATCGGTGCGAGGATTTTGATCCTACCACAGTACCCACCCTTTCACAGTTGATAGAAGAGCTTAATAATGAAGGCTCAAGAGCTGATGTTGATGGTGAATGGAATAGAACTTCGCTTGGAAATGCCATTACACTATTCAGATCATCATTCTTACAACCTTTACTAAAAGCCTGCAAGGAGGAAATAGAAAATTCCTATAACTTCAAATTGCAGCAGTCAAAGAATTCCCTCGGTATTTGA 1527 0.4126 MCLLVGQSKRTQKTKEWAKRGLGPLVSQFPATYMLIFPPSHSHTSITCSLGSFVPILQIQFSDPVHNFNDPTTRTRFQSQSSQTILRWVSYGNDGKHPGCDKSYFGRREFSFTLENDIYLRFQSFNNALELENSVKEKSPVKIDIGPVYTVDPAKRNAYAQSENNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTTAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRMTNEQRAAVADYFRVYKGNENSHKKVSLTGASLHPFLATSYTNVLKDYFEKKLLTGQNLLATEERYEKILNMIPDECTFFPVLPSFEPCYFISAIILCKGGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCVEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPNRCEDFDPTTVPTLSQLIEELNNEGSRADVDGEWNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNFKLQQSKNSLGI 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2540g00008 508 NCBIfam eukaryotic-type DNA primase catalytic subunit PriS 105 449 IPR014052 GO:0003896|GO:0006269
Mupr2540g00008 508 Pfam DNA primase small subunit 176 428 IPR002755 GO:0003896|GO:0006269
Mupr2540g00008 508 PANTHER DNA PRIMASE SMALL SUBUNIT 82 493 - -
Mupr2540g00008 508 FunFam DNA primase 78 489 - -
Mupr2540g00008 508 SUPERFAMILY Prim-pol domain 84 452 - -
Mupr2540g00008 508 Gene3D DNA primase, PRIM domain 76 489 - -
Mupr2540g00008 508 CDD AE_Prim_S 96 437 IPR014052 GO:0003896|GO:0006269
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2540g00008 85 507 Core DNA Replication Machinery Family AT5G41880 65.330 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2540g00008 K02684 - gmx:100780574 770.77