Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2539g00003 ATGTCATTGCATATCAGGATCTGCTGCTTTGGTGCTCCACCCTTTGTCTTCGAGCTTCTGGAATTTTCCATGGAGACAGAGAACGGTGACACGAGGTCCAAAAAGATGGAAGAATACCAAGTCATAGAGCAAATTGGAAGAGGAGCTTTTGGCTCTGCCTTCCTCGTTCTTCACAAGTCCGAGAAAAAGAGGTATGTGCTGAAAAAGATTCGGTTGGCCAAGCAGACAGAGAAGTTCAAACGTACAGCACACCAAGAGATGAACCTGATTGCAAAACTGAATAACCCATATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACCATATATGCATTATAACTGGTTATTGTGAAGGAGGTGACATGACTGAGAACATAAAGAAAGTTCGAGGATCATTTTTTCCTGAGGAGGTCTGCAAATGGCTGACTCAGTTGTTGATAGCTGTGGACTACTTGCACTCTAATCGTGTAATCCATAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGACAACAACATTCGGCTTGGTGACTTTGGTCTTGCAAAGCGACTTAATGCAGAAGACCTTGCTTCCTCGGTTGTTGGAACTCCAAATTACATGTGTCCTGAGCTCCTTGCTGATATACCATATGGCTATAAATCTGACATGTGGTCTCTTGGTTGCTGCATGTTTGAGATTGCTGGACACCAACCAGCATTTCGTGCTCCGGACATGGCTGGACTTATCAATAAAATAAACAGATCCTCCATTTCTCCACTGCCAATTGTTTATTCTTCCACACTGTAA 798 0.4323 MSLHIRICCFGAPPFVFELLEFSMETENGDTRSKKMEEYQVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKRTAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIITGYCEGGDMTENIKKVRGSFFPEEVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNAEDLASSVVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAGHQPAFRAPDMAGLINKINRSSISPLPIVYSSTL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2539g00003 265 Gene3D Phosphorylase Kinase; domain 1 20 118 - -
Mupr2539g00003 265 ProSitePatterns Serine/Threonine protein kinases active-site signature. 159 171 IPR008271 GO:0004672|GO:0006468
Mupr2539g00003 265 Pfam Protein kinase domain 39 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2539g00003 265 FunFam Serine/threonine-protein kinase Nek6 24 118 - -
Mupr2539g00003 265 SUPERFAMILY Protein kinase-like (PK-like) 33 252 IPR011009 -
Mupr2539g00003 265 SMART serkin_6 39 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2539g00003 265 ProSitePatterns Protein kinases ATP-binding region signature. 45 68 IPR017441 GO:0005524
Mupr2539g00003 265 Gene3D Transferase(Phosphotransferase) domain 1 121 264 - -
Mupr2539g00003 265 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 36 265 - -
Mupr2539g00003 265 ProSiteProfiles Protein kinase domain profile. 39 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2539g00003 Mupr-Chr2539 37656 41367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2539g00003 32 230 MAP Kinase Kinase Kinase AT3G13530 35.644 5.79e-32 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mupr2539g00003 Pkinase 7.9e-59 CL0016