Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2539g00001 ATGGAGTCTCACAATGAGACAGGATGCCAGGCTCCAGAACGTCCTATTCTCTGCATTAATAATTGTGGATTCTTTGGAAGAGCAGCTACCATGAACATGTGTTCCAAGTGTTACAAAGACATGTTGTTGAAGCAGGAGCAGGACAAACTTGCAGCATCGTCAGTTGAAAATATTGTGAATGGCCCTTCCAGTGGCAAGGGTAAGCAGGCTGTGACTACAGATGCTGTTGATGTACAAGTTGGAACCGTGGAGGTCAAGAGTATTTGTCCTCAGAGTTCTGCAGATTTCTCTTTCGGTGGGAGTTTGGAGGCAAAAGCCAAGACCGTTCCCAATAGATGTGCTACATGCCGGAAACGTGTTGGGTTAACTGGTTTCAATTGTAAATGTGGCAACCTCTTCTGTGCAATTCATCGTTATTCTGACAAACATGATTGCCCTTTTGACTACCGCACTGTTGGTCAGGATGCCATAGCTAAAGCAAATCCAGTAGTCACAATAATGGAGTCTCACGATGAGACTGGATGCCAGGCTCCAGAACGTCCCATTCTCTGCATTAATAATTGTGGATTCTTTGGAAGAGCATCTACCATGAACATGTGTTCCAAGTGTTACAAGGATATGATGTTGAAGCAGGAACAGGACAAACTTGCAGCATCATCGGTTGAAAGCATTGTGAATGGAAGTTCCAATGGCAATGGTAAGCAGGTTGTGACTACAGGTGCGGTTGATGTACAAGTTGGAACTGTGGAGGTCAAGAGTATATGTGCTCAGAGTTCTACAGATTTTTCCTTTGGTGGGAATTTGGAGATGAAAGCCAAGACCGTTCCCAGTAGATGCGCCACATGCCAGAAACGTATTGGGTTAACTGGTTTCAGCTGCAAATGTGGCAACCTCTTCTGTGCAATGCATCGCTACTCTGATAAACATGATTGCACTTTTGACTATCGGTCTGTTGGCCAGGATGCTATAGCTAAAGCCAATCCAGTAATTAAGGCAGATAAGCTTGACAAAATCTAG 1017 0.4444 MESHNETGCQAPERPILCINNCGFFGRAATMNMCSKCYKDMLLKQEQDKLAASSVENIVNGPSSGKGKQAVTTDAVDVQVGTVEVKSICPQSSADFSFGGSLEAKAKTVPNRCATCRKRVGLTGFNCKCGNLFCAIHRYSDKHDCPFDYRTVGQDAIAKANPVVTIMESHDETGCQAPERPILCINNCGFFGRASTMNMCSKCYKDMMLKQEQDKLAASSVESIVNGSSNGNGKQVVTTGAVDVQVGTVEVKSICAQSSTDFSFGGNLEMKAKTVPSRCATCQKRIGLTGFSCKCGNLFCAMHRYSDKHDCTFDYRSVGQDAIAKANPVIKADKLDKI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2539g00001 338 SUPERFAMILY AN1-like Zinc finger 105 165 IPR035896 -
Mupr2539g00001 338 SUPERFAMILY AN1-like Zinc finger 271 333 IPR035896 -
Mupr2539g00001 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
Mupr2539g00001 338 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 FunFam Zinc finger AN1-type containing 6 91 167 - -
Mupr2539g00001 338 Pfam A20-like zinc finger 182 205 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 SMART A20_3 181 205 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 Gene3D - 94 167 IPR035896 -
Mupr2539g00001 338 Gene3D - 263 334 IPR035896 -
Mupr2539g00001 338 ProSiteProfiles Zinc finger AN1-type profile. 273 319 IPR000058 GO:0008270
Mupr2539g00001 338 FunFam Zinc finger AN1-type containing 6 256 334 - -
Mupr2539g00001 338 SMART AN1_Zf_4 279 316 IPR000058 GO:0008270
Mupr2539g00001 338 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mupr2539g00001 338 Pfam AN1-like Zinc finger 279 315 IPR000058 GO:0008270
Mupr2539g00001 338 Pfam AN1-like Zinc finger 113 149 IPR000058 GO:0008270
Mupr2539g00001 338 PANTHER AN1-TYPE ZINC FINGER PROTEIN 180 338 - -
Mupr2539g00001 338 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Mupr2539g00001 338 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 183 221 - -
Mupr2539g00001 338 ProSiteProfiles Zinc finger A20-type profile. 178 212 IPR002653 GO:0003677|GO:0008270
Mupr2539g00001 338 Gene3D - 1 62 - -
Mupr2539g00001 338 Gene3D - 168 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2539g00001 Mupr-Chr2539 8208 18557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2539g00001 171 338 C2H2 Transcription Factor Family AT3G52800 41.420 2.85e-37 130