Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2530g00002 ATGATTATAATTTCAGACATAATTAAAATAAGAGAGTCCAACTCTTACCTCCCAAACAAACCCTTCCCCGCCGGAGCCGCCGCCACCAGCCGCCGGCCACCGTATCCGACCCTGCCACTCTCGAGGATTTCATTTCAACAGCTCTTCAATTTGACGCAGAACCGCCGAGTTTCGTGGTTCCGATTCTCAATTCCCCTTCCATTCCGAGTAGAATTTGAAATTCCGAAGAAAACCGCACTGAGCACTGAATTTCAGATTCTGAACAGGTTCTTCATCGAGCAATGCTTCAATTTCATGCTGAATCACCAAGTCAAACCGATTCGCGCCACCACTGACTTCGCGATTCATTTCGTCTTTCACAGCGCTTCCATTTTCCGTCCGCTGAACCTTGCCGTTCGTCGATGGCGGACTCAGACAGCGACTCCGGCAGTGCACAACGCCAGTAAGAGCAGCAAGATGTCGCCGCAGGAGCTGGACTGGTTTCTGCCAAATCATGAAGAATGCTTCATCACCGGCAAAGCCTCCGACAAGTGCCAGCGTGAGATGCGCAAGACGATCAATGGCCACAATCTTCTTTGGGCGATGACTATTGCATTATTTTTGGGCTTTCACTTGTCTGGATAA 624 0.4968 MIIISDIIKIRESNSYLPNKPFPAGAAATSRRPPYPTLPLSRISFQQLFNLTQNRRVSWFRFSIPLPFRVEFEIPKKTALSTEFQILNRFFIEQCFNFMLNHQVKPIRATTDFAIHFVFHSASIFRPLNLAVRRWRTQTATPAVHNASKSSKMSPQELDWFLPNHEECFITGKASDKCQREMRKTINGHNLLWAMTIALFLGFHLSG 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2530g00002 207 Gene3D Histone, subunit A 168 204 IPR009072 GO:0046982
Mupr2530g00002 207 SUPERFAMILY Histone-fold 169 203 IPR009072 GO:0046982
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2530g00002 Mupr-Chr2530 10713 11732 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2530g00002 138 204 CCAAT-HAP3 Transcription Factor Family AT4G14540 52.941 1.72e-12 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2530g00002 K08065 - gmx:100813580 65.4698