Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2529g00002 ATGACAGATCCTCAGTCCAATCTGTTCCATGAATGGTTCAACTTCATGCTCCTCCACCCTCACTACTCTTCTTCTCATCAATCCTACCCTGTTGCTAATTACTCAAACAATAGCAGGTTTGGAATTCAATTACAAGGAGCCTCATCTTCCTCTTTAGCTCCTCCTTCTTCCCCTCCTCTCAGAGAGGCCCTTCCTCTCATCAACAAGATAAGCCTCACAAAACAGCAACAGCAGCACCAAAACAATGAACCCTCAAATGTTATAGAAGAGGACAAGAAAGTGGACAATAACAAACATGAGAATGGTGAAGATGGTGATGATGAAACTGTGACTGTTGCCCTACACATAGGGCTTCCTAGAATGGATACTTGTTCTGATCTGGGGCCATCAAGGGTGGCCTCAACTTGTATGGAAATGGGTGAAAAAGAGGAAGTGAATATGATTTCTGAACAGCCTTTGGATAGATTGAACAAGGGTCAGTACTGGATTCCCACCCCTTCTCAGATTCTCATTGGTCCTACACAGTTCCCATGTCCTGTGTGCTCTAAAACTTTCAACAGATACAATAATCTTCAGATGCATATGTGGGGACATGGATCTCAATACAGAAAGGGGCCTGATTCTCTAAAAGGAACACAACCAACAGCTATGCTAAGGCTTCCATGCTTTTGTTGTGCACCAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGATTTCAGAACTCTCCAAACACACTACAAGAGAAAGCATGGTATAAAGCCCTACATGTGCAGAAAATGTGGCAAAGCATTTGCAGTGAAAGGTGACTGGAGAACACATGAGAAGAACTGTGGCAAAATATGGTATTGTTTATGTGGGTCTGATTTCAAACACAAAAGGTCCCTAAAAGACCACATCAAGGCCTTTGGCTATGGCCATGGTGCTTATGGCATCGATTGCTTGCAAGAAGAAGATGAGGCAGCCTCTGAAGTTGAACATGATGGGGAGGGTTCAATGTGA 1014 0.4398 MTDPQSNLFHEWFNFMLLHPHYSSSHQSYPVANYSNNSRFGIQLQGASSSSLAPPSSPPLREALPLINKISLTKQQQQHQNNEPSNVIEEDKKVDNNKHENGEDGDDETVTVALHIGLPRMDTCSDLGPSRVASTCMEMGEKEEVNMISEQPLDRLNKGQYWIPTPSQILIGPTQFPCPVCSKTFNRYNNLQMHMWGHGSQYRKGPDSLKGTQPTAMLRLPCFCCAPGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHEKNCGKIWYCLCGSDFKHKRSLKDHIKAFGYGHGAYGIDCLQEEDEAASEVEHDGEGSM 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2529g00002 337 FunFam Zinc finger protein WIP2 229 311 - -
Mupr2529g00002 337 Gene3D Classic Zinc Finger 175 198 - -
Mupr2529g00002 337 ProSiteProfiles Zinc finger C2H2 type domain profile. 176 203 IPR013087 -
Mupr2529g00002 337 ProSitePatterns Zinc finger C2H2 type domain signature. 178 198 IPR013087 -
Mupr2529g00002 337 ProSiteProfiles Zinc finger C2H2 type domain profile. 260 280 IPR013087 -
Mupr2529g00002 337 SMART c2h2final6 260 280 IPR013087 -
Mupr2529g00002 337 SMART c2h2final6 176 198 IPR013087 -
Mupr2529g00002 337 SUPERFAMILY beta-beta-alpha zinc fingers 244 280 IPR036236 -
Mupr2529g00002 337 SUPERFAMILY beta-beta-alpha zinc fingers 172 198 IPR036236 -
Mupr2529g00002 337 Gene3D Classic Zinc Finger 238 311 - -
Mupr2529g00002 337 MobiDBLite consensus disorder prediction 73 107 - -
Mupr2529g00002 337 Pfam C2H2-type zinc finger 176 195 - -
Mupr2529g00002 337 FunFam zinc finger protein WIP2-like 175 198 - -
Mupr2529g00002 337 PANTHER ZINC FINGER PROTEIN WIP2 23 330 IPR043584 GO:0003700|GO:0010468
Mupr2529g00002 337 MobiDBLite consensus disorder prediction 85 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2529g00002 Mupr-Chr2529 5045 7763 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2529g00002 1 330 C2H2 Transcription Factor Family AT3G57670 57.412 6.24e-126 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr2529g00002 zf-C2H2_6 2.6e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2529g00002 - - gmx:100794446 612.838