Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2516g00001 TTTTTCGAAACCTTAGCTCAGAGAGAGAGAGAGAGAGAGAAGCAATCGTCGTCTCTCTTCTATGAGCTTCACTTCGATTCCCGCCACTTCTCTGTAAGCATAGGATTTTGGGTTCTTGAAGGATATATGGCTGAGGTGAAATCAGAGGAGTGTTGTCAGGAGAATAAACAATCTACTGCTGCTTCTTGCTCTTCTGTATCTGAAGGGAGTGGCAGTGCAATTCACAAGTCTCCAGGGATATGTAGCCCCGGATCCACATCACCCTCACATCGGAGGACCACTGGCCCTATAAGGCGTGCTAAGGGTGGTTGGACAGCACAGGAGGATGAGACATTAAGGAATGCTGTTGCAGTTTTTAAGGGAAAGAGTTGGAAGAAAATAGCCGAGTTTTTTCCTGATAGATCAGAAGTTCAGTGTCTGCACAGATGGCAAAAAGTTCTTAATCCAGAACTTGTTAAGGGACCTTGGACACAGGAGGAGGATGACAAAATTGTTGAACTGGTGTCAAAATACGGGCCTACAAAATGGTCTTTGATAGCCAAGTCTTTACCTGGTCGAATAGGGAAACAGTGTCGAGAGCGGTGGCACAATCATCTTAACCCTGACATAAAGAAGGATGCCTGGACTTTGGAGGAGGAATTAGCCTTGATGAATGCTCATCATATACATGGGAACAAATGGGCTGAAATAGCTAAGGTTCTTCATGGAAGGACTGATAATGCAATAAAGAATCACTGGAATAGTTCTTTGAAGAAAAAGTTGGATTTTTATTTAGCTACAGGAAGACTTCCACCAATTCCCAAGAATAGTCCACAAGTTGCTGTCAAAGATACAATTAGACGTTCTGCTAGTAAAACAATACTTGTTTGTTCAAATAAAGAATTAAATGCAGCTGTTGAAACATCATCTGAAACTACAGCCATTAGTAAAGTAGATGACAGTGGTAGGAATCAGTTTGAATCCTCAGGAACAGTTAGAGAAGTTGGTGAGTCTTCAAGTGTTCCTGCAAATGAATCTACTGATTCTGACTGTGTAGAATGCAAGCCTGGATCATCCAACATCGATCTTAGCTGTAGCAACTCAGAACAAGTGTCAAGAGCTAATTTTGGAATAACTTATGGGCCAAGATCTGAGAATTCTGGACTCAATGGAAACTTAACCTTTGAGCATTGTACAAACAATGGTGACATGAGCAGTACCAGGTTAATCAGAACATCTTTGCAAGAAAGTCCAACCTGTGGTTCTTTGTGTTATGAGCCACCACAGATAGATGGTTCAGTTCCCATAGATTCTCTTTATTTAATTTGCCAGCAGAACGAGTACTGTTTGAGTCCAACGCAGTCACCTATTGGTTTCTTCACTCCACCTCGTGTGAAGGGTGGTGAATTATGCACCGAGACACCTGAATCAATATTGAAAAAGGCTGCTAATACTTTTCCAAATACTCCTTCCATATTGAGGAGGAGAAGAACTGGAATCCAAACACTCACCAGTCCTAGTAAAGTTTTGAAGGTAGAAAATGATCCACATACTTCTAATGAAATAGAGAGAACCAATGATGATTCTCGTTCTGGTCGTTTCTTTGGGAGTCCAGCAAGCCATTGCAATGGGATTGACATTCCCAATAATAAGGCATTCAATGCATCTCCCCCATACAGGTTAAGATCCAAGCGAACAGCAATTGTCAAGTCAGTGGAGAAACAACTGGAATTTGCATTTGACAAAGAGAAGAAAAATGACAAGAGGAGCAATGTGATGACCGAAGATTGTCTGCATGAAACAAAA 1785 0.4151 FFETLAQREREREKQSSSLFYELHFDSRHFSVSIGFWVLEGYMAEVKSEECCQENKQSTAASCSSVSEGSGSAIHKSPGICSPGSTSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKKIAEFFPDRSEVQCLHRWQKVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKDAWTLEEELALMNAHHIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLPPIPKNSPQVAVKDTIRRSASKTILVCSNKELNAAVETSSETTAISKVDDSGRNQFESSGTVREVGESSSVPANESTDSDCVECKPGSSNIDLSCSNSEQVSRANFGITYGPRSENSGLNGNLTFEHCTNNGDMSSTRLIRTSLQESPTCGSLCYEPPQIDGSVPIDSLYLICQQNEYCLSPTQSPIGFFTPPRVKGGELCTETPESILKKAANTFPNTPSILRRRRTGIQTLTSPSKVLKVENDPHTSNEIERTNDDSRSGRFFGSPASHCNGIDIPNNKAFNASPPYRLRSKRTAIVKSVEKQLEFAFDKEKKNDKRSNVMTEDCLHETK 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2516g00001 595 MobiDBLite consensus disorder prediction 63 105 - -
Mupr2516g00001 595 Gene3D - 206 277 - -
Mupr2516g00001 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 204 254 IPR017930 -
Mupr2516g00001 595 SUPERFAMILY Homeodomain-like 98 154 IPR009057 -
Mupr2516g00001 595 CDD SANT 155 199 IPR001005 -
Mupr2516g00001 595 Gene3D - 100 152 - -
Mupr2516g00001 595 CDD SANT 207 250 IPR001005 -
Mupr2516g00001 595 FunFam Transcription factor MYB3R-2 206 271 - -
Mupr2516g00001 595 Pfam Myb-like DNA-binding domain 205 248 IPR001005 -
Mupr2516g00001 595 Pfam Myb-like DNA-binding domain 153 199 IPR001005 -
Mupr2516g00001 595 Pfam Myb-like DNA-binding domain 101 147 IPR001005 -
Mupr2516g00001 595 Gene3D - 153 204 - -
Mupr2516g00001 595 PANTHER MYB PROTEIN-RELATED 101 172 - -
Mupr2516g00001 595 ProSiteProfiles Myb-like domain profile. 148 199 IPR001005 -
Mupr2516g00001 595 MobiDBLite consensus disorder prediction 312 345 - -
Mupr2516g00001 595 MobiDBLite consensus disorder prediction 574 595 - -
Mupr2516g00001 595 FunFam Transcriptional activator Myb isoform A 100 152 - -
Mupr2516g00001 595 CDD SANT 104 147 IPR001005 -
Mupr2516g00001 595 FunFam Transcriptional activator Myb isoform A 153 205 - -
Mupr2516g00001 595 ProSiteProfiles Myb-like domain profile. 200 250 IPR001005 -
Mupr2516g00001 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 148 203 IPR017930 -
Mupr2516g00001 595 SMART sant 204 252 IPR001005 -
Mupr2516g00001 595 SMART sant 100 149 IPR001005 -
Mupr2516g00001 595 SMART sant 152 201 IPR001005 -
Mupr2516g00001 595 MobiDBLite consensus disorder prediction 79 93 - -
Mupr2516g00001 595 SUPERFAMILY Homeodomain-like 150 246 IPR009057 -
Mupr2516g00001 595 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 101 147 IPR017930 -
Mupr2516g00001 595 ProSiteProfiles Myb-like domain profile. 96 147 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2516g00001 Mupr-Chr2516 9828 19145 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2516g00001 30 591 MYB Transcription Factor Family AT3G09370 47.735 1.67e-157 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mupr2516g00001 Myb_DNA-bind_6 4.9e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2516g00001 K09422 - gmx:778081 1014.6