Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr24g00004 ATGGAGGTAGCGGTAGCCAAAGCTTTGAAAACGAGTTTAAGGAGAGAGTTTATCGTTCAGCAAACTTCCTGGGAGGAAAATTTGTGCCTGAACCCGAACACCGTCGCCGGCGGCGAAGATTTCTCCGTCGACGACCTATTTGATTTCTCCGACGGCTCTCTTCACTATGAACAACAAGAATACGACGAAGAAAAAGAAACTTTATCGGTTTCGTCGCAGTCACAGGACCGCGGAGGAGAAGACGATAGCAACTCCAATTCCACCGGCGGTTCATATGATTCTCTTTTCACCGCCGAATTAGCCGTTCCGGCCGGTGATTTGGAGGACCTAGAGTGGGTTTCTCACTTTGTGGACGATTCTCTCCCGGAGCTGTCACTTTTATACCCGGTTCGTTCGGAGGAAGCGAACCGGTGGGTTGAACCGGAGCCTTCAGCGAAGAAAACGCCTCGTTTTCCGTGCAAGGCGAGAAGCGTACGGAGTAGAAAACCGAACGCTCGCGTTTGGTCGTTGGGCCCCTTGCTCTCGCTCCCGTCTTCTCCGTCGTCGTGTTCTTCTTCTGCGACGGAGCCGCCCGCTAAGAAGCAGAAGAAGCGGGCTGAGGCCCAGGCCGTTGGGGCCCAGATTCAGCGGCGGTGCAGTCACTGCCAGGTGCAGAAGACGCCGCAGTGGAGGACCGGGCCACTGGGCGCGAAAACCCTTTGCAACGCGTGCGGGGTTCGGTACAAGTCGGGGCGTCTTTATTCAGAGTATAGACCCGCGTGTAGCCCCACCTTCTGCAGCGATATTCACTCCAATAGTCACCGCAAAGTGTTGGAGATTCGGAAGAGGAAGGAGGTGCCTGGACCGGAGACCGGTTTGGCCCAGGCCCAAATGGTACTAGGCACTAGTCAGCGGTCCGTTTTGGCTTTCGTGAGAGAGAGGGAGAGGTGGGTCAGAGTTTGGAGTGTGATTGAAGCGTTGGAGTTGGGTGGCATGGCACTACTCGTTTTAGTGGGTGGAGGTGGAGATGGATTATTGGTTGATCTTTACCATCGTGTTGTACTTGATCTGTTTCAACACCATCTTTGTAGACTTGCTTATGAGAGGTTTCCTTGGGGAGTTTGGATGATCACCTCGTACCCTAATTTATAA 1131 0.5358 MEVAVAKALKTSLRREFIVQQTSWEENLCLNPNTVAGGEDFSVDDLFDFSDGSLHYEQQEYDEEKETLSVSSQSQDRGGEDDSNSNSTGGSYDSLFTAELAVPAGDLEDLEWVSHFVDDSLPELSLLYPVRSEEANRWVEPEPSAKKTPRFPCKARSVRSRKPNARVWSLGPLLSLPSSPSSCSSSATEPPAKKQKKRAEAQAVGAQIQRRCSHCQVQKTPQWRTGPLGAKTLCNACGVRYKSGRLYSEYRPACSPTFCSDIHSNSHRKVLEIRKRKEVPGPETGLAQAQMVLGTSQRSVLAFVRERERWVRVWSVIEALELGGMALLVLVGGGGDGLLVDLYHRVVLDLFQHHLCRLAYERFPWGVWMITSYPNL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr24g00004 376 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 206 267 - -
Mupr24g00004 376 MobiDBLite consensus disorder prediction 71 91 - -
Mupr24g00004 376 Gene3D - 205 256 IPR013088 GO:0006355|GO:0008270
Mupr24g00004 376 Pfam GATA zinc finger 212 245 IPR000679 GO:0006355|GO:0043565
Mupr24g00004 376 FunFam GATA transcription factor 202 288 - -
Mupr24g00004 376 PANTHER GATA TRANSCRIPTION FACTOR 29 285 - -
Mupr24g00004 376 SMART GATA_3 206 260 IPR000679 GO:0006355|GO:0043565
Mupr24g00004 376 ProSitePatterns GATA-type zinc finger domain. 212 237 IPR000679 GO:0006355|GO:0043565
Mupr24g00004 376 MobiDBLite consensus disorder prediction 176 190 - -
Mupr24g00004 376 MobiDBLite consensus disorder prediction 58 91 - -
Mupr24g00004 376 MobiDBLite consensus disorder prediction 135 149 - -
Mupr24g00004 376 MobiDBLite consensus disorder prediction 133 158 - -
Mupr24g00004 376 MobiDBLite consensus disorder prediction 176 203 - -
Mupr24g00004 376 CDD ZnF_GATA 211 268 IPR000679 GO:0006355|GO:0043565
Mupr24g00004 376 ProSiteProfiles GATA-type zinc finger domain profile. 206 242 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr24g00004 Mupr-Chr24 24880 27514 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr24g00004 40 277 C2C2-Gata Transcription Factor Family AT4G36240 45.059 9.36e-55 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr24g00004 GATA 2.9e-15 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr24g00004 - - gmx:100780311 426.402