Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2492g00003 ATGCCCAAAGATGGTGGCATGATGAGGAACTCCTACAACCACTTTGGGTTTAGGACAAGGAGTGAGGATCATGTTTTCCTCTCTGACTCTGTCGACGGTCTTATCAATGTCATCATGGGCTCCATCATTGCCACCATCTCAAATTGCCACATGACCAAACATAATGATGTGATGCTATTTGGGGCCAGATACTAG 195 0.4564 MPKDGGMMRNSYNHFGFRTRSEDHVFLSDSVDGLINVIMGSIIATISNCHMTKHNDVMLFGARY 64
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2492g00003 64 SUPERFAMILY Pectin lyase-like 23 62 IPR011050 -
Mupr2492g00003 64 Gene3D - 22 64 IPR012334 -
Mupr2492g00003 64 PANTHER PECTATE LYASE 18-RELATED 23 62 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2492g00003 Mupr-Chr2492 4676 4917 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2492g00003 5 63 Polysaccharide Lyase AT5G15110 47.945 4.20e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2492g00003 K01728 - gmx:100785801 90.1225