Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2492g00002 ATGGTCATCGAAGCCTCTGATGATGACATGGTGAATCCCAAGTCAGGAACTCTCTGTTTTGCCATTGAGCTCTTGATTTCCTCTAGCAAGACAATTGATGGTCGTGGTGTGAACGTGCAAATCAAGAATGGTGGTGGCCTCACCATGCAGTACATGAACAATGTCATCATCCATGGAACTTGA 183 0.4536 MVIEASDDDMVNPKSGTLCFAIELLISSSKTIDGRGVNVQIKNGGGLTMQYMNNVIIHGT 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2492g00002 60 SUPERFAMILY Pectin lyase-like 5 59 IPR011050 -
Mupr2492g00002 60 Gene3D - 2 60 IPR012334 -
Mupr2492g00002 60 PANTHER PECTATE LYASE 18-RELATED 14 59 IPR045032 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2492g00002 Mupr-Chr2492 4421 4663 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2492g00002 1 59 Polysaccharide Lyase AT3G01270 45.570 1.08e-16 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2492g00002 K01728 - gmx:100810615 75.0997