Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2491g00002 ATGGAGAGCGTAATGGTTGGTAATGCAATCAAGGTTGCTTTCATTCTCTTGATTACTCTGACTGTTATCATTCCATGTCTCGAGGCTGGCATTGCTGAGTTTGATAATTTTCTAAAAATCCAAGCTGAGGAAGCCTACAAAATTGCTCTCGACACCTATGTCCCTACCCCTGAAGATGTTGTTAATGAACTCAATCTCCATGTTCATTTGGCATTGGAAAACAGCACAGCTACAAGGAGGAGAGAACTAGGACAGAAAAAACTTAAAGGACCATGTAAGGCCTCAAACCCCATTGACTCTTGCTGGAGATGCAACGCAGATTGGGCCAATGATCGTAAGAAGTTGGCTAAGTGTAGCAAAGGGTTCGGAAGAAGGGCTGTCGGTGGGCTCGATGGACCCTTCTACGTGGTCACCGACAACTCTGACGATGACATGGTGAATCCCAAGCCAGGAACTCTCCGTCATGCCGTTGTCCAAGATGGCCCATTGTGGATTACATTCGAGCGTAGCATGATCATTGAGTTGAGGCAGGAGCTGTTGATTTCCTCCAACAAGACCATTGATGGCCGCGGTGCGAACGTGCAGATCAAGAATGGTGGTGGCCTTACCATGCAGTACGTGAACAATGTCATCATCCATGGAATTCGTGTAAAAAATATCGTGCCCAAAGATGGTGGCATGATTAGGGATTCCTACAACCACTTTGGGTTTAGGACAAGGAGCGACGGTGACGCCATCTCCCTATTTGGGGCCTCCAATATTTGGATAGACCATGTTTCTCTCTCTAATTCTGGCGATGGTCTTATCGATGTTATCATGGGTTCGACCGGCATCACCATCTCAAATTGTCACATGACCAAACATAACGATGTAAGCACTTATCTTATTCATTCATACGAACTTCTAACACTGGTGATGCTATTTGGGGCCAATGAACACCACGAGCAAGACAGAATCATGCAAATCACCGTGGCATTCAACCACTTCGGGCAGGGCCTGATTCAGAGGATGCCTAGGTGCAGATTTGGGTTCGTGCATGTCCTCAACAATGACTACACCCACTGGCTCATGTATGCAATCGGTGGAAGCTCAAACCCAACCATTCTGAGCCAAGGAAACCGGTTCATTGCTCCTAATGATGAGAACGCCAAGACAATCACACATAGAGATTATGCAACACCTGAAGAGTGGAAGAATTGGCAATGGCAATCCGATATGGACCTTTTCATGAATGGTGCTAAGTTCATCGGTTCCGGGGCTCCCATCCAGTTGACCTACAATAAGGGTTTGATCATGAAACCAAGAGATGGAACTCACGTTAGCAGGCTAACACGACACGCTGGTGCCTTGGACTGCTTCGTGGGCAAGCCTTGTTAG 1377 0.4691 MESVMVGNAIKVAFILLITLTVIIPCLEAGIAEFDNFLKIQAEEAYKIALDTYVPTPEDVVNELNLHVHLALENSTATRRRELGQKKLKGPCKASNPIDSCWRCNADWANDRKKLAKCSKGFGRRAVGGLDGPFYVVTDNSDDDMVNPKPGTLRHAVVQDGPLWITFERSMIIELRQELLISSNKTIDGRGANVQIKNGGGLTMQYVNNVIIHGIRVKNIVPKDGGMIRDSYNHFGFRTRSDGDAISLFGASNIWIDHVSLSNSGDGLIDVIMGSTGITISNCHMTKHNDVSTYLIHSYELLTLVMLFGANEHHEQDRIMQITVAFNHFGQGLIQRMPRCRFGFVHVLNNDYTHWLMYAIGGSSNPTILSQGNRFIAPNDENAKTITHRDYATPEEWKNWQWQSDMDLFMNGAKFIGSGAPIQLTYNKGLIMKPRDGTHVSRLTRHAGALDCFVGKPC 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2491g00002 458 PANTHER PECTATE LYASE 18-RELATED 45 456 IPR045032 GO:0030570
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 400 424 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 336 355 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 118 135 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 142 167 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 429 452 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 178 194 IPR018082 -
Mupr2491g00002 458 PRINTS Pollen allergen Amb family signature 358 377 IPR018082 -
Mupr2491g00002 458 Pfam Pectate lyase 177 375 IPR002022 -
Mupr2491g00002 458 SMART amb_all 170 381 IPR002022 -
Mupr2491g00002 458 SUPERFAMILY Pectin lyase-like 96 449 IPR011050 -
Mupr2491g00002 458 Gene3D - 95 451 IPR012334 -
Mupr2491g00002 458 Pfam Pectate lyase, N terminus 31 83 IPR007524 GO:0030570
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2491g00002 Mupr-Chr2491 12086 13635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2491g00002 20 458 Polysaccharide Lyase AT1G14420 55.604 3.06e-179 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2491g00002 K01728 - gmx:100810615 739.184