Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2473g00002 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCGGCTCGGATAAAAAAGATAATGCAAGCAGACGAGGATGTTGGAAAGATAGCACTGGCTGTGCCTGTTTTAGTTTCTAAAGCTCTGGAACTATTTTTGCAAGATCTTTGTGACCGTACTTACGAAATAACTGTTCAAAAAGGAGCAAAGACCATGAGTTCATTGCATTTAAAACATTGTGTAGAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTCAGCAAGGTTCCTGACTACAGCCAAGGCCATGGCCATGCTGAGGCCGGTGCTGATGACCGGGCCATTCCAAAAAGAAGGAAAGCTGTTGGTGATGATTCTAATGACAGCGATGAAGAGGCTAAGAGGAGCAAGATGCATGAGTTGAGCCACAGTGGCAGTAGTACTGGAAGGGGAAGAGGCAGAGGTAGAGGAAGAGGGCGAGGGCGAGGGCGACCACCTCTTGTAAGAGAGACACATCATCAGGATCCTGAATCTGAGCCTTGCACTTCAGCTCAGCCAGGCAACCAACAAAACACAAACACAAGTGTGGCAGCAGTGGATGGTGGTTCTGAGTCAAAGGAGATTACAAAGGAGAACATTGCACTTCCTGTTGTAAGCACCGATTCACTCCCGAATATTGACCTCAATGCCAGTATGAATGAAAATGATGACAAGCCTAGCACAGCAGCTGATGCCACATTGCCTGAACCTGCCACCACCTCACTGCCTGAACCCGCCACCGCCTCATTGCCTGAACCTCCAATGGAGAGCAAGCACGAAGAGATTCCGGGGTGGTCGCTTTCTGATGTGGACAAGATGGCCATTGATTCAATGCAGCTTGCACAGCTGGGTAGGCCACTAGAAGAGGAAGAGGAAGATTATGATGAGGAGGAAGATATTACTGCAAATATCTAA 927 0.479 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITVQKGAKTMSSLHLKHCVESYNVFDFLRDVVSKVPDYSQGHGHAEAGADDRAIPKRRKAVGDDSNDSDEEAKRSKMHELSHSGSSTGRGRGRGRGRGRGRGRPPLVRETHHQDPESEPCTSAQPGNQQNTNTSVAAVDGGSESKEITKENIALPVVSTDSLPNIDLNASMNENDDKPSTAADATLPEPATTSLPEPATASLPEPPMESKHEEIPGWSLSDVDKMAIDSMQLAQLGRPLEEEEEDYDEEEDITANI 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 154 168 - -
Mupr2473g00002 308 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 129 - -
Mupr2473g00002 308 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Mupr2473g00002 308 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Mupr2473g00002 308 SUPERFAMILY Histone-fold 4 97 IPR009072 GO:0046982
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 292 308 - -
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 169 191 - -
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 90 273 - -
Mupr2473g00002 308 FunFam dr1-associated corepressor homolog 1 86 - -
Mupr2473g00002 308 Coils Coil 291 308 - -
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 206 231 - -
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 287 308 - -
Mupr2473g00002 308 MobiDBLite consensus disorder prediction 96 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2473g00002 Mupr-Chr2473 6055 12021 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2473g00002 1 291 CCAAT-HAP5 Transcription Factor Family AT3G12480 52.131 1.08e-77 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mupr2473g00002 CBFD_NFYB_HMF 5.1e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2473g00002 K21752 - gmx:100814712 448.358