Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2472g00001 ATGGACACAGCTCAATGGCCACAGGAGATGGTGGTGAAGCCAATAGGAGACTTAGTAGTGACAAATACATGTTCAAAGGGTGGTGGAGGTGTGGTGGAAAGGAAGCCAAGGCCACAGAAAGAACAAGCTGTGAACTGTCCAAGGTGTCATTCAATTAACACCAAGTTCTGCTACTACAACAACTACAGCCTGACACAGCCTCGCTATTTCTGCAAGACTTGTAGAAGGTATTGGACTGAAGGTGGATCCCTCAGAAACATCCCTGTAGGAGGTGGCTCAAGGAAGAACAAGAGATCTTCTGCTTCTTGTTCCACACCTAATAATCATAACAATAATTCAACCAATAAGAAGCTTCCTGATCTGGTCATCACACCTCCAACTGTGTCACACACTACTCAAAACCCTAAGAATAATAATAATAATATTCATCATGGTCAAGATCTCAATTTGGCTTTCCCATCCACCACCCCAGATTTTAGAAACATATCTGAATTGGTTCAACAAAATAAGAATAGTGGCAACAGTATGTCAGCTTCTTCTTCTTCTTCTTCTTCAACTACAACTACTACTACAGCTACAGCTACAACTTCTCACCTTTCTGCATTGGAGCTTCTTACTGGCATCACTTCAAGTTCCACTGGTTTGACTTCTTTCATGCCTGTGCCAGTTCCACCTGATCCAAATTCTGTCTACACTTGTGGCTTTCCTCTGCAAGATTTCAAGCCAACCTTGAATTTCTCTTTGGATGGGATTGGAAACGGGTACGCAGGCCTTCAGAATGTTCAAAGTGGGAGGCTCTTGTTTCCATTTGAGGACCTAAAACAGGTTTCTAGCACCACCACAATGGATCAGAAGCAACAAGGAGATTCAACTGGGTATTGGACTGGAATATCATGGGGACTTCACTTGTTTGGATTTCTTCATAACTGGCTAACAGCTGATAGGATCCGTTCATACATCTGTTTCTTTTCCTTTTCTGTCAATTTCTCGTGTATCTACCTAGCTAGCTACCTAGCTCCTCTTCTCTTCGTGACCAAGCTTGATGGAATCTTGAAATTATGA 1062 0.4256 MDTAQWPQEMVVKPIGDLVVTNTCSKGGGGVVERKPRPQKEQAVNCPRCHSINTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSASCSTPNNHNNNSTNKKLPDLVITPPTVSHTTQNPKNNNNNIHHGQDLNLAFPSTTPDFRNISELVQQNKNSGNSMSASSSSSSSTTTTTTATATTSHLSALELLTGITSSSTGLTSFMPVPVPPDPNSVYTCGFPLQDFKPTLNFSLDGIGNGYAGLQNVQSGRLLFPFEDLKQVSSTTTMDQKQQGDSTGYWTGISWGLHLFGFLHNWLTADRIRSYICFFSFSVNFSCIYLASYLAPLLFVTKLDGILKL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2472g00001 353 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Mupr2472g00001 353 MobiDBLite consensus disorder prediction 85 154 - -
Mupr2472g00001 353 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Mupr2472g00001 353 MobiDBLite consensus disorder prediction 169 191 - -
Mupr2472g00001 353 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 190 IPR045174 GO:0003700|GO:0006355
Mupr2472g00001 353 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Mupr2472g00001 353 MobiDBLite consensus disorder prediction 93 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2472g00001 Mupr-Chr2472 8021 9805 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2472g00001 1 297 C2C2-Dof Transcription Factor Family AT4G24060 43.875 1.36e-57 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Mupr2472g00001 zf-Dof 6.9e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2472g00001 - - gmx:100782268 455.677