Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2471g00004 ATGGAGATGGAGCGCATTGTTGAATTCCCTCACACCTACATGGATCGACCCCCGAGAAAGAGAGCGCGTCTGGGCTGGGACATCGCCGAGGTCCCCAAGGCTCAGGTAGGATTGTTTTGTGGACAAGAGGTTGAGAATATTTCAAGCTATGCTCCTTCAGAACATCCCACTAGTTCTCTGTTTAAGGGAATTGCTCGAAATGGTTCTCCCCCATGGCGAGATGATGACAAAGATGATAAGATACATAGCAAAATGGGCGAAGGAACCTTTGGGCAGGTCTTGGAGTGCTGGGACAGAGAAAGGAAGGAAATGGTTGCCATAAAAATTGTCCGAGGGATAAAGAAGTATAGAGAGGCAGCCATGATAGAAATTGAGGTGCTGCAACAGCTTGGGAAACATGATAAAGGTAGCAATCGTTGTGTGCAAATACGGAACTGGTTTGACTATCGTAATCATATCTGTATTGTGTTTGAGAAACTTGGACCAAGCTTATACGATTTTCTTCGGAAAAACAGTTATCGTTCATTTCCCATTGATCTTGTCCGTGAGATTGGCCGGCAACTATTGGAATGTGTAGCATTTATGCATGACTTACGCATGATCCATACTGACCTGAAGCCTGAAAACATACTTCTAGTCTCACCAGAGTATCTTAAAATTCCTGACTACAAGAGTACATCCAAATCACCATGTTCTTTTTTCAAGAGAGTGCCCAAGTCAAGTGCTATAAAGGTTATTGATTTTGGCAGCACTACATATGAACGAGATGATCAGAATTACATTGTATCAACTCGTCATTATAGGGCACCTGAAGTTATCCTTGGACTTGGGTGGAGCTATCCCTGTGATATATGGAGTGTGGGTTGTATATTGGTTGAATTATGCACTGGTGAAGCTTTGTTTCAGACTCATGAAAATTTGGAGCATCTGGCTATGATGGAGAGGGTTCTTGGTCCCATACCGCAGCAGATGTTGAAGAGAGTTGACCGACATGCAGAGAAGTATGTCCGAAGGGGTAGATTGGACTGGCCAGAGGGTGCAACTTCGAGAGAGAGTATTAAAGCTGTAATGAAGCTTCCCAGACTACAGAACCTTGTAATGCAGCATGTTGATCATTCAGCTGGAGATCTTATACATCTTTTGCAGGGGCTACTTAGATATGACCCCTTTGAAAGATTTACAGCTAGGGATGCTCTGAAGCATTCCTTCTTTACGAGAGATCACCTTAGGAGATGA 1236 0.4369 MEMERIVEFPHTYMDRPPRKRARLGWDIAEVPKAQVGLFCGQEVENISSYAPSEHPTSSLFKGIARNGSPPWRDDDKDDKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGSNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYRSFPIDLVREIGRQLLECVAFMHDLRMIHTDLKPENILLVSPEYLKIPDYKSTSKSPCSFFKRVPKSSAIKVIDFGSTTYERDDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPIPQQMLKRVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLPRLQNLVMQHVDHSAGDLIHLLQGLLRYDPFERFTARDALKHSFFTRDHLRR 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2471g00004 411 FunFam Serine/threonine-protein kinase AFC2 155 404 - -
Mupr2471g00004 411 CDD PKc_CLK 80 404 - -
Mupr2471g00004 411 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Mupr2471g00004 411 ProSiteProfiles Protein kinase domain profile. 79 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2471g00004 411 Gene3D Transferase(Phosphotransferase) domain 1 133 404 - -
Mupr2471g00004 411 SMART serkin_6 79 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2471g00004 411 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 1 407 - -
Mupr2471g00004 411 SUPERFAMILY Protein kinase-like (PK-like) 80 408 IPR011009 -
Mupr2471g00004 411 Gene3D Phosphorylase Kinase; domain 1 80 159 - -
Mupr2471g00004 411 Pfam Protein kinase domain 82 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2471g00004 Mupr-Chr2471 10442 14073 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2471g00004 84 404 Core Cell Cycle Gene Families AT1G76540 25.373 2.10e-26 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Mupr2471g00004 Pkinase 3.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2471g00004 K08287 - gmx:100808961 811.986