Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2466g00002 ATGCTTCTCAAATTTGTTTATATCATCATTTTGGTTACATGGCGCACATATCCATTAACATGTGCACAATATCAGAATCAGACTATAGCACAACCCTTTTGTAATTCGACATGTGGGAATGTTCCCATTCCTTACCCTTTCGGAATGGGCGATCCGAAATGCTATGCAAGCGAGTGGTTTGAAATAGAATGCAACAGTACTTCTGAAGGTGAGAAACCTTACCTCAAGTCGAATAATATAGGTTTGGAGGTAATATCCATTTATCTCTCCGGTTATGTTTTGATTAAGAATCCGATTTACCATGGGACTGGGAAGGAGACAGGCATAGAACTAGGAGGTCCATTTGTGTATTCCCAGTATTACAACTCATTTGTGGCCGTAGGTTGCCAAAGCGCTGCTGTCTTGCGCTCAAACAAAACAACTATTGGTTGTATGTCCATGTGTTACGAGGACCGAAAAAGTGGAAGTAAGTTAAATAACATTGACGTTGCAAGTTGTCGTGGTACGTACTGCTACGAGGCTTCACTGCCGCCGTATCTTTCAGAGTATACCATCAGTTGTGGTGGATATATATCTGTGAGTAATAGTGTGACCGAAGCATCAGGGTGCCGTTATGCGCTGATTATAGGAAATAATAATAAGTTCCCGTACAGGGTTCTCACTATTGGGGACCTAAAGAACTTATATGATATTCCTGCGGTGCTTGAATGGGAGATTACGAATTCCACGCTCAAAGTTACTGCAATTACACTAATGTTACATCTCCACAACTCCCAGGTTGGAGATGTACCTGCAAGCTTCCCTTTGAGGGAAATCCCTACATTCAGGGAGGTTGTAAAGTGTTCTTATATCCATTTGTGTGTCAACTTAACCCTAACTACAATATCTAAATGCATAGGAGTTTCTTCGCGCCTTGGAACCATCATTTTACTCCTTGGAAAAAAAATAGAAAAGAAACGCAAAGAAAAGTTCTTCCAACAAAATGGAGGATTGTTATTGGAACAAAGACTATCTTCTGGTAAAGTTAATGTTGACAAAATTAAACTTTTAAGCTTAAAGGACTTAGAGAAGGCCACCGATCACTTTAATATAAATAGCATACTTGGAAAGGGAGGTCAAGGTACTGTTTACAAAGGGATGCTAGTAGATGGAAAAATCGTTGCAGTGAAAAAGTTTAAGGTCAAAGGAAATGTTGAAGAATTCATCAATGAATTTATCATTCTTTCACAAATTAACCATAGGAACGTGGTTAAGTTGTTAGGATGTTGTTTGGAGTCTGAAGTTCCTTTGCTTGTTTATGAATTCATTCCAAATGGTACCCTTTTTGAATATATACATGGACAAAATGATGACTTACCAATGACATGGGATGTACGTTTGAGAATAGCCACCGAAGTTGCTAGAGCTCTATTTTACTTACATTCAGCTGCTTCTCAGCCCATTTATCACAGAGACATCAAGTCAACAAATATATTGTTGGATGAGAATTATAAGGCCAAAGTAGCAGACTTTGGTGCATCAAGAATGGTTTCCATTGAAGATACTCACCTCACTACTGTAGTTCAAGGAACTTTTGGATACTTGGATCCTGAGTATTTCCACACTAGTCGATTGACAGAGAAGAGTGATGTTTACAGCTTTGGAGTGGTTCTTGTTGAACTTTTAACCGGGAAAAAGCCAATATCCTCTGTAAAACACCAAGAACTTAGAAGTTTGGCTTCATATTTTGTTCTCTGTGTGGAGGAAAATCGTTTGTTTGATATTATTGATGAAAGAATCATGAGGGAAGGGGAGAAAGAAAACATCATTGTAGTTGCCAATCTTGCAAGAAGATGCTTAGAGTTGACTGGGAGAAAACGACCAACCATGGAAGAAGTCACATCAGAATTGGAAAGTATCCGAAAATTGGAAAACAAGTCTAATGCACAAGAACACCATGAAGAACTTGAGATCGATGGAATTGAAGACTTCCAATTTTGGGCTGTGTATTCTACGACTTCAAATACAGGGCAAACATCAGACAGCAAAGCATCAATCTTGGAGATTATGCCTATTCTATCAACTAATTGA 2070 0.387 MLLKFVYIIILVTWRTYPLTCAQYQNQTIAQPFCNSTCGNVPIPYPFGMGDPKCYASEWFEIECNSTSEGEKPYLKSNNIGLEVISIYLSGYVLIKNPIYHGTGKETGIELGGPFVYSQYYNSFVAVGCQSAAVLRSNKTTIGCMSMCYEDRKSGSKLNNIDVASCRGTYCYEASLPPYLSEYTISCGGYISVSNSVTEASGCRYALIIGNNNKFPYRVLTIGDLKNLYDIPAVLEWEITNSTLKVTAITLMLHLHNSQVGDVPASFPLREIPTFREVVKCSYIHLCVNLTLTTISKCIGVSSRLGTIILLLGKKIEKKRKEKFFQQNGGLLLEQRLSSGKVNVDKIKLLSLKDLEKATDHFNINSILGKGGQGTVYKGMLVDGKIVAVKKFKVKGNVEEFINEFIILSQINHRNVVKLLGCCLESEVPLLVYEFIPNGTLFEYIHGQNDDLPMTWDVRLRIATEVARALFYLHSAASQPIYHRDIKSTNILLDENYKAKVADFGASRMVSIEDTHLTTVVQGTFGYLDPEYFHTSRLTEKSDVYSFGVVLVELLTGKKPISSVKHQELRSLASYFVLCVEENRLFDIIDERIMREGEKENIIVVANLARRCLELTGRKRPTMEEVTSELESIRKLENKSNAQEHHEELEIDGIEDFQFWAVYSTTSNTGQTSDSKASILEIMPILSTN 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2466g00002 689 CDD STKc_IRAK 368 633 - -
Mupr2466g00002 689 Pfam Wall-associated receptor kinase galacturonan-binding 34 91 IPR025287 GO:0030247
Mupr2466g00002 689 SUPERFAMILY Protein kinase-like (PK-like) 344 631 IPR011009 -
Mupr2466g00002 689 Pfam Protein kinase domain 363 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2466g00002 689 SMART serkin_6 362 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2466g00002 689 FunFam Wall-associated receptor kinase 2 332 435 - -
Mupr2466g00002 689 ProSiteProfiles Protein kinase domain profile. 362 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mupr2466g00002 689 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 25 642 IPR045274 GO:0007166
Mupr2466g00002 689 Gene3D Transferase(Phosphotransferase) domain 1 436 657 - -
Mupr2466g00002 689 Gene3D Phosphorylase Kinase; domain 1 330 435 - -
Mupr2466g00002 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mupr2466g00002 689 FunFam Wall-associated receptor kinase 2 436 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2466g00002 Mupr-Chr2466 3934 8655 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2466g00002 34 684 Receptor kinase-like Gene Family AT1G79680 41.060 4.50e-156 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Mupr2466g00002 Pkinase 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2466g00002 - - gmx:100799320 818.535