Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mupr2464g00004 | ATGGAAGGATCCCTGTGTGTGCGAAAAGGTGCATGGAGTGAAGTGGAAGATGACCTTCTCAGGGCGTGCGTGCGACAATATGGGGAAGGAAAATGGCACTTAGTGCCTTCAAGAGCAGGCTTGAACAGGTGCCGCAAAAGCTGCAGATTGAGATGGTTGAACTATCTCAAACCAAATATCAAGCGGGGAGATTTTACTGAAGATGAGGTTGATTTGATCATCAGATTGCATAAGCTTTTGGGAAACAGATGGTCTCTGATTGCTGGAAGACTTCCAGGAAGAACACCAAATGACGTGAAAAACTACTGGAACACGTACATTCGCAGGAAAGCATCGTCTCACAAGAAGGTGGTGATGAACGAAAAGGAAGAGGAAAGGGTGAAACCTCACGTGGTGATAAAGCCCCTTGCTCGAACTATCTCAAGATCTTCACCCTTGTTGTTGAGTAGTGTTGTTGGGGAAGGTGACAGTGGGGCCAAACATTGCTCAACTCAATCATGTGCCACATCATCAGAGTGCAATAATTGGTGTTGGGAAACCTTCATGGACGACAACGGGGGCAACCTAGACAACAACCTAGATGGGGTTGGGACTCTCGTCGAAGACATCGATTGTTCTCATGATCTTACTTCGTTGACCCAGCAAGATCGAGATTTTTTTATAGAAAGTCAAAATTGGAGTGATTTTCTTAATATAAATTTGTGGAATTCCTGA | 714 | 0.4482 | MEGSLCVRKGAWSEVEDDLLRACVRQYGEGKWHLVPSRAGLNRCRKSCRLRWLNYLKPNIKRGDFTEDEVDLIIRLHKLLGNRWSLIAGRLPGRTPNDVKNYWNTYIRRKASSHKKVVMNEKEEERVKPHVVIKPLARTISRSSPLLLSSVVGEGDSGAKHCSTQSCATSSECNNWCWETFMDDNGGNLDNNLDGVGTLVEDIDCSHDLTSLTQQDRDFFIESQNWSDFLNINLWNS | 237 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mupr2464g00004 | 237 | FunFam | Transcription factor MYB113 | 64 | 135 | - | - | |
| Mupr2464g00004 | 237 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 57 | 111 | IPR017930 | - | |
| Mupr2464g00004 | 237 | ProSiteProfiles | Myb-like domain profile. | 8 | 56 | IPR001005 | - | |
| Mupr2464g00004 | 237 | Pfam | Myb-like DNA-binding domain | 9 | 56 | IPR001005 | - | |
| Mupr2464g00004 | 237 | Pfam | Myb-like DNA-binding domain | 62 | 106 | IPR001005 | - | |
| Mupr2464g00004 | 237 | CDD | SANT | 11 | 56 | IPR001005 | - | |
| Mupr2464g00004 | 237 | Gene3D | - | 64 | 132 | - | - | |
| Mupr2464g00004 | 237 | ProSiteProfiles | Myb-like domain profile. | 57 | 107 | IPR001005 | - | |
| Mupr2464g00004 | 237 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 7 | 56 | IPR017930 | - | |
| Mupr2464g00004 | 237 | CDD | SANT | 65 | 107 | IPR001005 | - | |
| Mupr2464g00004 | 237 | PANTHER | TRANSCRIPTION FACTOR MYB8-RELATED-RELATED | 7 | 128 | - | - | |
| Mupr2464g00004 | 237 | Gene3D | - | 9 | 61 | - | - | |
| Mupr2464g00004 | 237 | SMART | sant | 61 | 109 | IPR001005 | - | |
| Mupr2464g00004 | 237 | SMART | sant | 8 | 58 | IPR001005 | - | |
| Mupr2464g00004 | 237 | SUPERFAMILY | Homeodomain-like | 8 | 103 | IPR009057 | - | |
| Mupr2464g00004 | 237 | FunFam | Myb transcription factor | 9 | 61 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mupr2464g00004 | Mupr-Chr2464 | 19879 | 21808 | Dispersed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mupr2464g00004 | 7 | 110 | MYB Transcription Factor Family | AT1G66370 | 75.962 | 2.02e-54 | 173 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TF | MYB | Mupr2464g00004 | Myb_DNA-binding | 3.4e-15 | CL0123 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Mupr2464g00004 | - | K16166 | gmx:100306270 | 326.25 |