Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2461g00008 ATGAGAAAAAATTCCATGGCAAATTCCCCTTTTTCTAACTCAGAATTCACATCCCCTTTAGATTATCGCACCAAACACCACCACCGTTTACCATCACCACCATCTTTGCTCATGAACCAGCCTCTAGAGCATCTCCCCTTTGCAACCCCGCCTGCTAAGAGAACACGCGGGAGGCCCCCAGGATCTAAGAACAAGCCCAAGCACGCCTCCATCCCTGGGGCCCAACTCGTTGATCCATTCGTGAAGCTCGTTATGGTCAATGTGCCCCCTGGTAATGATGTCATTGAGTCCATCATTGACATCGCTCGTCGAGGTCGTGCCAGCCTCACGATCCTCAACGCAGATGGCATGATCGCCAGTGTCACCCTTCGCAATGCACAACATGGTGCACCCACACTCACACTCCATGGGCCCTTCACTTTACTCTCCCTCACTGGCTCTTACATCTATGGTAACCAATACAGCCTTCACCTTGGAGCAACCCCTCCCCGTCCCCTCTCCTTCGGAATCAACCTCTCCACCTTGCAAGGCCAAATCTTTGGCGGTGTCGTCGATGGCAAAGTTATTGCTGCTGACGGTGTCAACATTGTCACCTCCACTTTCAAGAATCCTGAGATTTACAAGTATGTTCCTGAAGGCATAGAAAGGGACGGCGATGACAATAATAGTAACAATAACTATATTAATTTCAATGGGGGTGATGACTTGTCAAGGTTCAACATGACCACCTCACTAAATCTCGCCATCTGTACCACCACCACCATCATCTTCTACCATGAACTAGCCCTCAGAGCATCTCCCTTTGGTGACCTCACCCACTAG 822 0.4988 MRKNSMANSPFSNSEFTSPLDYRTKHHHRLPSPPSLLMNQPLEHLPFATPPAKRTRGRPPGSKNKPKHASIPGAQLVDPFVKLVMVNVPPGNDVIESIIDIARRGRASLTILNADGMIASVTLRNAQHGAPTLTLHGPFTLLSLTGSYIYGNQYSLHLGATPPRPLSFGINLSTLQGQIFGGVVDGKVIAADGVNIVTSTFKNPEIYKYVPEGIERDGDDNNSNNNYINFNGGDDLSRFNMTTSLNLAICTTTTIIFYHELALRASPFGDLTH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2461g00008 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 84 202 IPR005175 -
Mupr2461g00008 273 CDD DUF296 86 199 IPR005175 -
Mupr2461g00008 273 ProSiteProfiles PPC domain profile profile. 77 222 IPR005175 -
Mupr2461g00008 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 83 208 - -
Mupr2461g00008 273 Gene3D - 80 216 - -
Mupr2461g00008 273 MobiDBLite consensus disorder prediction 1 71 - -
Mupr2461g00008 273 FunFam AT-hook motif nuclear-localized protein 17 80 217 - -
Mupr2461g00008 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 223 IPR014476 GO:0003680
Mupr2461g00008 273 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2461g00008 Mupr-Chr2461 40423 46802 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2461g00008 53 208 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 37.576 1.08e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2461g00008 - - gmx:100818645 268.47