Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2456g00003 ATGGGCATACTTCCTCACTTGAAAATGATCCATTTTAATTATTTTAGATCTTTGTTGAAAGTATTGATTTTCACTTCTATGATGAATTTTTCTTCAACTTCTGATAAAGGAAATGCCAAGGGGAAAGAGAAAGGATACAAGTGCTCTTATTGTGAAAAAGTATTTGACAACTATCAAGGTCTTGGAGGTCATCAAAGGGTACATGAAAGTAAGATTAAGCAACTCTTCCATCAAATGATTCATTTTCATAACTCAGCAGATATCACCAAATCCAATCCTGAACATGGGAATGTCTCAAAGAAAGGGAACTATCATGATGACAATAGCCAACAAGACCACAATTCATTGTTCATGTCCCCAAATTTTTCTTCTATAAGAACCAACGATGCATCCTTGGAAGCGTCAATTCAAGCTAACAATCATATAGGTCATGCACCGAGTCCAAGTTCTGTTGTTAACCATCAGTTTCATACTAGCAATTCACAACTTTTTGTTGACAATTTTTTGGACCCTTTTGGAAGCAATTTTGGAGAAAACAGTCATAATGATAACAACCTTCCATATCCAGTCTTTGTTAGAAATCCTTCTTTTCCAGGTTATCACATGCCTGAATTTGGTTTACCTAATATTGCGACTAACAAATTTCCTAGCTCAATTGACTCTAGTGTTTTTTTTAATACCCAAGCAAATTCTGTGGGCTCAGACAATAGTTATTATTATAATATGGACCAAGTTTCTGAGAGGGTAAAAAATCATAACAGAGATGAAGTTAAAGAAAAAATTGTCATGATAAGTCCACCAAAACGACCCAATATCAACTCTGATCGACCTGTCAATCATGAAAGAGAGATGCTGCAAAAGAAGGAAACACTTTTTCCTACCAAGGATGCAATGCCTGAAACTGAAGACGCAATTGTCTTAAAGGATGAAGAAAACCATGGTTCTACTTCAAAGAGCACAAATCATGTAAAAGAACAAGAAGTGGATTTGGATCTTTCCCTTCATCTGTAG 1011 0.3541 MGILPHLKMIHFNYFRSLLKVLIFTSMMNFSSTSDKGNAKGKEKGYKCSYCEKVFDNYQGLGGHQRVHESKIKQLFHQMIHFHNSADITKSNPEHGNVSKKGNYHDDNSQQDHNSLFMSPNFSSIRTNDASLEASIQANNHIGHAPSPSSVVNHQFHTSNSQLFVDNFLDPFGSNFGENSHNDNNLPYPVFVRNPSFPGYHMPEFGLPNIATNKFPSSIDSSVFFNTQANSVGSDNSYYYNMDQVSERVKNHNRDEVKEKIVMISPPKRPNINSDRPVNHEREMLQKKETLFPTKDAMPETEDAIVLKDEENHGSTSKSTNHVKEQEVDLDLSLHL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2456g00003 336 MobiDBLite consensus disorder prediction 308 336 - -
Mupr2456g00003 336 MobiDBLite consensus disorder prediction 86 120 - -
Mupr2456g00003 336 Pfam C2H2-type zinc finger 46 70 - -
Mupr2456g00003 336 SUPERFAMILY beta-beta-alpha zinc fingers 42 70 IPR036236 -
Mupr2456g00003 336 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Mupr2456g00003 336 SMART c2h2final6 46 68 IPR013087 -
Mupr2456g00003 336 Gene3D Classic Zinc Finger 26 115 - -
Mupr2456g00003 336 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2456g00003 19 97 C2H2 Transcription Factor Family AT1G67030 37.805 2.83e-06 45.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mupr2456g00003 zf-C2H2_6 2.3e-06 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2456g00003 - - gmx:102661343 366.696