Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2453g00001 ATGGATTTTGGAAAGACAAATGAGGCAGAAGCATTCAATTCAAAGGTTCATGACTTCGACTTAAACACTGCATATGTGGAGGAGGACTTTGATGTGAATGCTGAAAATGAGTTCTCATCGCCCATTCTCATAAATAATACTGATCAGGCTTCTCAAAATTGCATTGAAAACATGGTCATAGTGGATGCAAATAAGGATAACGATGAAGTTCACCAATCATCTGAAGTGGACACAACTATTGAAGCAAATTTTGCTGCTGAAGGAGCTACCTCTGAAGATACGAAGCAAGTTGAAGCAAAGTATATTGTCTCTGTCTCCTTTGCACCGGTAAGAATGTCACGTGGTCGCCGCCGCCGCTACCGCCATGGTGGAGAAGCTAAGCTGAGTGATTCAGATAAATTCTGCACAAATTTTTATTGTAAGACAAGAAGAACTCCCTTGTGGCGCAAGGGACCTTTGGGACCACAGACTTTGTGCAATGCTTGTGGCCTTCAATACATTAAGATGGTGTCACATAGAGGCAGTGACCTACCTGCTGCAGTTCCACATGAAGGTGATGCTTCCACTACTCATGATGATGATGGTGCTTCTCCAGGTTGCGATGGTTCACCTGATGAAACCATGCCAGGGGATTCCAATCTCTAA 645 0.4357 MDFGKTNEAEAFNSKVHDFDLNTAYVEEDFDVNAENEFSSPILINNTDQASQNCIENMVIVDANKDNDEVHQSSEVDTTIEANFAAEGATSEDTKQVEAKYIVSVSFAPVRMSRGRRRRYRHGGEAKLSDSDKFCTNFYCKTRRTPLWRKGPLGPQTLCNACGLQYIKMVSHRGSDLPAAVPHEGDASTTHDDDGASPGCDGSPDETMPGDSNL 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2453g00001 214 PANTHER OS01G0976800 PROTEIN 83 168 - -
Mupr2453g00001 214 SMART GATA_3 129 182 IPR000679 GO:0006355|GO:0043565
Mupr2453g00001 214 CDD ZnF_GATA 134 178 IPR000679 GO:0006355|GO:0043565
Mupr2453g00001 214 ProSiteProfiles GATA-type zinc finger domain profile. 140 166 IPR000679 GO:0006355|GO:0043565
Mupr2453g00001 214 Gene3D - 131 191 IPR013088 GO:0006355|GO:0008270
Mupr2453g00001 214 MobiDBLite consensus disorder prediction 177 214 - -
Mupr2453g00001 214 Pfam GATA zinc finger 140 168 IPR000679 GO:0006355|GO:0043565
Mupr2453g00001 214 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 132 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2453g00001 Mupr-Chr2453 1903 3356 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2453g00001 133 168 C2C2-Gata Transcription Factor Family AT3G20750 58.333 3.12e-11 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mupr2453g00001 GATA 5.5e-12 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2453g00001 - - gmx:102663335 239.195