Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mupr2452g00001 ATGAAACTCAATGGCCTGGAGTCATTTGACTTCCCACGTGGCCAAGGTCACAGAGGTGGTGACATTGAGTTAGGAGAATATGGGAGGAATTCAGGAGAATTGGGCTTGGAGAGTTTCTTAAAAAAGGTTCAAGAACTTGATAAACATCATGCTAAGCTGGATAAGCTATTGAAAAAGCTCCAGGATGCCCATGAGGAATCCAAAGGTGTGTCCAAGGCTCCTGCCATGAAGGATTTAAGGCAGAAAATGGAGAAAGATGTTGATGAAGTTAAGAAAACTGCACATTTCTTAAAGACCAAAATTGAAGAACTTGACAAAGAGAATTTGGCAAACAGGCAGAAGCCTGGGTGTGGAAAGGGATCAGGTGTTGACCGGTCAAGAACAGCAACAACCATTTCTTTAAAAAAGAAACTGAAAGATAAAATGACCGAATTTCAGACCCTGAGAGAGGTCATCCATGTAGAGTATCGCGAGGTTGTTGAGAGACGTACAATTGACAGATTAATTGAAACTGGGGATAGTGAACAAATTTTCCAGAAGGCAATTCAGGAACAAGGACGAGGCCAGATAACGGACACCTTGGCTGAAATTCAAGAGCGACATGAAGCAGTTAGAGATGTTGAGAGAAAGCTTCTAGATTTACAACAGATATTTCTGGATATTGCGGTGTTGGTGGATGCACAAGGAGACATGCTTGACAACATAGAATCACAGGTTTCCGGTGCTGTGGATCACGTACAGCAAGGCAACAACGCCCTGCTGACGGCAAAGCAACTTCAAAGGAACTCTAGAAAATGGATGTGCCTCGCAATCATGATACTTCTCATCATTATTATGATAATCGTTGTTGGTATCATCAAACCATGGAGTAGCAAAAATGGTGCATAG 888 0.4234 MKLNGLESFDFPRGQGHRGGDIELGEYGRNSGELGLESFLKKVQELDKHHAKLDKLLKKLQDAHEESKGVSKAPAMKDLRQKMEKDVDEVKKTAHFLKTKIEELDKENLANRQKPGCGKGSGVDRSRTATTISLKKKLKDKMTEFQTLREVIHVEYREVVERRTIDRLIETGDSEQIFQKAIQEQGRGQITDTLAEIQERHEAVRDVERKLLDLQQIFLDIAVLVDAQGDMLDNIESQVSGAVDHVQQGNNALLTAKQLQRNSRKWMCLAIMILLIIIMIIVVGIIKPWSSKNGA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mupr2452g00001 295 ProSitePatterns Syntaxin / epimorphin family signature. 200 239 IPR006012 GO:0005484|GO:0006886|GO:0016020
Mupr2452g00001 295 SMART tSNARE_6 189 256 IPR000727 -
Mupr2452g00001 295 Pfam SNARE domain 230 282 IPR000727 -
Mupr2452g00001 295 FunFam Syntaxin 132 187 287 - -
Mupr2452g00001 295 Coils Coil 80 107 - -
Mupr2452g00001 295 MobiDBLite consensus disorder prediction 1 22 - -
Mupr2452g00001 295 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 194 256 IPR000727 -
Mupr2452g00001 295 PANTHER SYNTAXIN 48 278 IPR045242 -
Mupr2452g00001 295 SMART SynN_4 31 157 IPR006011 GO:0016020
Mupr2452g00001 295 Pfam Syntaxin 38 229 IPR006011 GO:0016020
Mupr2452g00001 295 CDD SNARE_syntaxin1-like 193 255 - -
Mupr2452g00001 295 Gene3D - 184 287 - -
Mupr2452g00001 295 SUPERFAMILY t-snare proteins 35 249 IPR010989 GO:0016020|GO:0016192
Mupr2452g00001 295 Gene3D - 34 160 - -
Mupr2452g00001 295 Coils Coil 43 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mupr2452g00001 Mupr-Chr2452 2065 11275 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mupr2452g00001 8 295 SNARE and Associated Proteins AT3G03800 67.333 1.16e-136 387
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mupr2452g00001 K08486 - gmx:100306329 461.07